Far-red fluorescent tags for protein imaging in living tissues

被引:398
作者
Shcherbo, Dmitry [1 ]
Murphy, Christopher S. [2 ,3 ]
Ermakova, Galina V. [1 ]
Solovieva, Elena A. [1 ]
Chepurnykh, Tatiana V. [4 ]
Shcheglov, Aleksandr S. [1 ]
Verkhusha, Vladislav V. [5 ]
Pletnev, Vladimir Z. [1 ]
Hazelwood, Kristin L. [2 ,3 ]
Roche, Patrick M. [2 ,3 ]
Lukyanov, Sergey [1 ]
Zaraisky, Andrey G. [1 ]
Davidson, Michael W. [2 ,3 ]
Chudakov, Dmitriy M. [1 ]
机构
[1] Shemiakin Ovchinnikov Inst Bioorgan Chem, Moscow 117997, Russia
[2] Florida State Univ, Natl High Magnet Field Lab, Tallahassee, FL 32310 USA
[3] Florida State Univ, Dept Biol Sci, Tallahassee, FL 32310 USA
[4] Evrogen JSC, Moscow 117997, Russia
[5] Albert Einstein Coll Med, Dept Anat & Struct Biol, Bronx, NY 10461 USA
关键词
far-red fluorescence; fluorescent protein; fusion protein; photostability; whole-body imaging; CRYSTAL-STRUCTURE; MONOMERIC RED; ORANGE; RESOLUTION; EXPRESSION; FOREBRAIN; CORAL;
D O I
10.1042/BJ20081949
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A vast colour palette of monomeric fluorescent proteins has been developed to investigate protein localization, motility and interactions. However, low brightness has remained a problem in far-red variants, which hampers multicolour labelling and whole-body imaging techniques. In the present paper, we report mKate2, a monomeric far-red fluorescent protein that is almost 3-fold brighter than the previously reported mKate and is 10-fold brighter than mPlum. The high-brightness, far-red emission spectrum, excellent pH resistance and photostability, coupled with low toxicity demonstrated in transgenic Xenopus laevis embryos, make mKate2 a superior fluorescent tag for imaging in living tissues. We also report tdKatushka2, a tandem far-red tag that performs well in fusions, provides 4-fold brighter near-IR fluorescence compared with mRaspberry or mCherry, and is 20-fold brighter than mPlum. Together, monomeric mKate2 and pseudomonomeric tdKatushka2 represent the next generation of extra-bright far-red fluorescent probes offering novel possibilities for fluorescent imaging of proteins in living cells and animals.
引用
收藏
页码:567 / 574
页数:8
相关论文
共 19 条
[1]   The production, purification and crystallization of a pocilloporin pigment from a reef-forming coral [J].
Beddoe, T ;
Ling, M ;
Dove, S ;
Hoegh-Guldberg, O ;
Devenish, RJ ;
Prescott, M ;
Rossjohn, J .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2003, 59 :597-599
[2]   Fluorescent proteins as a toolkit for in vivo imaging [J].
Chudakov, DM ;
Lukyanov, S ;
Lukyanov, KA .
TRENDS IN BIOTECHNOLOGY, 2005, 23 (12) :605-613
[3]   Chromophore environment provides clue to "kindling fluorescent protein" riddle [J].
Chudakov, DM ;
Feofanov, AV ;
Mudriku, NN ;
Lukyanov, S ;
Lukyanov, KA .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (09) :7215-7219
[4]   The homeodomain factor Xanf represses expression of genes in the presumptive rostral forebrain that specify more caudal brain regions [J].
Ermakova, Galina V. ;
Solovieva, Elena A. ;
Martynova, Natalia Y. ;
Zaraisky, Andrey G. .
DEVELOPMENTAL BIOLOGY, 2007, 307 (02) :483-497
[5]   Far-red fluorescent tag for protein labelling [J].
Fradkov, AF ;
Verkhusha, VV ;
Staroverov, DB ;
Bulina, ME ;
Yanushevich, YG ;
Martynov, VI ;
Lukyanov, S ;
Lukyanov, KA .
BIOCHEMICAL JOURNAL, 2002, 368 :17-21
[6]   Cyan-emitting and orange-emitting fluorescent proteins as a donor/acceptor pair for fluorescence resonance energy transfer [J].
Karasawa, S ;
Araki, T ;
Nagai, T ;
Mizuno, H ;
Miyawaki, A .
BIOCHEMICAL JOURNAL, 2004, 381 :307-312
[8]   Patterning the forebrain:: FoxA4a/pintallavis and Xvent2 determine the posterior limit of Xanf1 expression in the neural plate [J].
Martynova, N ;
Eroshkin, F ;
Ermakova, G ;
Bayramov, A ;
Gray, J ;
Grainger, R ;
Zaraisky, A .
DEVELOPMENT, 2004, 131 (10) :2329-2338
[9]   Bright monomeric red fluorescent protein with an extended fluorescence lifetime [J].
Merzlyak, Ekaterina M. ;
Goedhart, Joachim ;
Shcherbo, Dmitry ;
Bulina, Mariya E. ;
Shcheglov, Aleksandr S. ;
Fradkov, Arkady F. ;
Gaintzeva, Anna ;
Lukyanov, Konstantin A. ;
Lukyanov, Sergey ;
Gadella, Theodorus W. J. ;
Chudakov, Dmitriy M. .
NATURE METHODS, 2007, 4 (07) :555-557
[10]   The 2.0-Å crystal structure of eqFP611, a far red fluorescent protein from the sea anemone Entacmaea quadricolor [J].
Petersen, J ;
Wilmann, PG ;
Beddoe, T ;
Oakley, AJ ;
Devenish, RJ ;
Prescott, M ;
Rossjohn, J .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (45) :44626-44631