Structural studies on 2-oxoglutarate oxygenases and related double-stranded β-helix fold proteins

被引:359
作者
Clifton, Ian J.
McDonough, Michael A.
Ehrismann, Dominic
Kershaw, Nadia J.
Granatino, Nicolas
Schofield, Christopher J.
机构
[1] Univ Oxford, Oxford Ctr Mol Sci, Oxford OX1 3TA, England
[2] Univ Oxford, Dept Chem, Chem Res Lab, Oxford OX1 3TA, England
基金
英国惠康基金; 英国生物技术与生命科学研究理事会;
关键词
cupin; double stranded beta-helix; DSBH; iron coordination; JmjC; metallo-enzyme; non-heme iron; 2-oxoglutarate; oxygenase; protein structure;
D O I
10.1016/j.jinorgbio.2006.01.024
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Mononuclear non-heme ferrous iron dependent oxygenases and oxidases constitute an extended enzyme family that catalyze a wide range of oxidation reactions. The largest known sub-group employs 2-oxoglutarate as a cosubstrate and catalysis by these and closely related enzymes is proposed to proceed via a ferryl intermediate coordinated to the active site via a conserved HXD/E...H motif. Crystallographic studies on the 2-oxoglutarate oxygenases and related enzymes have revealed a common double-stranded P-helix core fold that supports the residues coordinating the iron. This fold is common to proteins of the cupin and the JmjC transcription factor families. The crystallographic studies on 2-oxoglutarate oxygenases and closely related enzymes are reviewed and compared with other metallo-enzymes/related proteins containing a double-stranded beta-helix fold. Proposals regarding the suitability of the active sites and folds of the 2-oxoglutarate oxygenases to catalyze reactions involving reactive oxidizing species are described. (c) 2006 Elsevier Inc. All rights reserved.
引用
收藏
页码:644 / 669
页数:26
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