Circular RNA: New Regulatory Molecules

被引:64
作者
Belousova, E. A. [1 ]
Filipenko, M. L. [1 ]
Kushlinskii, N. E. [2 ]
机构
[1] Russian Acad Sci, Inst Chem Biol & Fundamental Med, Siberian Div, Novosibirsk, Russia
[2] Minist Hlth Russian Federat, NN Blokhin Natl Med Res Ctr Oncol, Moscow, Russia
关键词
circular RNA; noncanonical alternative splicing; deposition of minor interfering RNA depot; gene expression; diagnosis; LONG NONCODING RNAS; MESSENGER-RNA; EXON CIRCULARIZATION; INTERACTING PROTEINS; GENE-EXPRESSION; HUMAN SALIVA; BIOGENESIS; MICRORNA; REVEALS; CANCER;
D O I
10.1007/s10517-018-4084-z
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
100103 [病原生物学]; 100218 [急诊医学];
摘要
Circular RNA are a family of covalently closed circular RNA molecules, formed from pre-mRNA of coding genes by means of splicing (canonical and alternative noncanonical splicing). Maturation of circular RNA is regulated by cis- and trans-elements. Complete list of biological functions of these RNA is not yet compiled; however, their capacity to interact with specific microRNA and play a role of a depot attracts the greatest interest. This property makes circular RNA active regulatory transcription factors. Circular RNA have many advantages over their linear analogs: synthesis of these molecules is conservative, they are universal, characterized by clearly determined specificity, and are resistant to exonucleases. In addition, the level of their expression is often higher than that of their linear forms. It should be noted that expression of circular RNA is tissue-specific. Moreover, some correlations between changes in the repertoire and intensity of expression of circular RNA and the development of some pathologies have been detected. Circular RNA have certain advantages and can serve as new biomarkers for the diagnosis, prognosis, and evaluation of response to therapy.
引用
收藏
页码:803 / 815
页数:13
相关论文
共 85 条
[1]
Circular RNAs in monkey muscle: age-dependent changes [J].
Abdelmohsen, Kotb ;
Panda, Amaresh C. ;
De, Supriyo ;
Grammatikakis, Ioannis ;
Kim, Jiyoung ;
Ding, Jun ;
Noh, Ji Heon ;
Kim, Kyoung Mi ;
Mattison, Julie A. ;
de Cabo, Rafael ;
Gorospe, Myriam .
AGING-US, 2015, 7 (11) :903-910
[2]
Posttranscriptional regulation of cancer traits by HuR [J].
Abdelmohsen, Kotb ;
Gorospe, Myriam .
WILEY INTERDISCIPLINARY REVIEWS-RNA, 2010, 1 (02) :214-229
[3]
tRNA splicing [J].
Abelson, J ;
Trotta, CR ;
Li, H .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (21) :12685-12688
[4]
Novel coding, translation, and gene expression of a replicating covalently closed circular RNA of 220 nt [J].
AbouHaidar, Mounir Georges ;
Venkataraman, Srividhya ;
Golshani, Ashkan ;
Liu, Bolin ;
Ahmad, Tauqeer .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (40) :14542-14547
[5]
A Micropeptide Encoded by a Putative Long Noncoding RNA Regulates Muscle Performance [J].
Anderson, Douglas M. ;
Anderson, Kelly M. ;
Chang, Chi-Lun ;
Makarewich, Catherine A. ;
Nelson, Benjamin R. ;
McAnally, John R. ;
Kasaragod, Prasad ;
Shelton, John M. ;
Liou, Jen ;
Bassel-Duby, Rhonda ;
Olson, Eric N. .
CELL, 2015, 160 (04) :595-606
[6]
Andreeva K, 2015, ADV BIOSCI BIOTECHNO, V6, P433, DOI [10.42361abb.2014.66043, DOI 10.4236/ABB.2015.66043]
[7]
miARma-Seq: a comprehensive tool for miRNA, mRNA and circRNA analysis [J].
Andres-Leon, Eduardo ;
Nunez-Torres, Rocio ;
Rojas, Ana M. .
SCIENTIFIC REPORTS, 2016, 6
[8]
Inhibition of RNA lariat debranching enzyme suppresses TDP-43 toxicity in ALS disease models [J].
Armakola, Maria ;
Higgins, Matthew J. ;
Figley, Matthew D. ;
Barmada, Sami J. ;
Scarborough, Emily A. ;
Diaz, Zamia ;
Fang, Xiaodong ;
Shorter, James ;
Krogan, Nevan J. ;
Finkbeiner, Steven ;
Farese, Robert V., Jr. ;
Gitler, Aaron D. .
NATURE GENETICS, 2012, 44 (12) :1302-1309
[9]
circRNA Biogenesis Competes with Pre-mRNA Splicing [J].
Ashwal-Fluss, Reut ;
Meyer, Markus ;
Pamudurti, Nagarjuna Reddy ;
Ivanov, Andranik ;
Bartok, Osnat ;
Hanan, Mor ;
Evantal, Naveh ;
Memczak, Sebastian ;
Rajewsky, Nikolaus ;
Kadener, Sebastian .
MOLECULAR CELL, 2014, 56 (01) :55-66
[10]
Correlation of circular RNA abundance with proliferation - exemplified with colorectal and ovarian cancer, idiopathic lung fibrosis, and normal human tissues [J].
Bachmayr-Heyda, Anna ;
Reiner, Agnes T. ;
Auer, Katharina ;
Sukhbaatar, Nyamdelger ;
Aust, Stefanie ;
Bachleitner-Hofmann, Thomas ;
Mesteri, Ildiko ;
Grunt, Thomas W. ;
Zeillinger, Robert ;
Pils, Dietmar .
SCIENTIFIC REPORTS, 2015, 5 :8057