Effects of microsolvation on uracil and its radical anion:: Uracil•(H2O)n (n=1-5)

被引:43
作者
Kim, Sunghwan [1 ]
Schaefer, Henry F., III [1 ]
机构
[1] Univ Georgia, Ctr Computat Chem, Athens, GA 30602 USA
基金
美国国家科学基金会;
关键词
THEORETICAL AB-INITIO; NUCLEIC-ACID BASES; ELECTRON-AFFINITIES; EXCESS-ELECTRON; IONIZATION-POTENTIALS; REDUCTION POTENTIALS; AQUEOUS-SOLUTION; REDOX CHEMISTRY; WATER CLUSTERS; DNA-DAMAGE;
D O I
10.1063/1.2356464
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Microsolvation effects on the stabilities of uracil and its anion have been investigated by explicitly considering the structures of complexes of uracil with up to five water molecules at the B3LYP/DZP++ level of theory. For all five systems, the global minimum of the neutral cluster has a different equilibrium geometry from that of the radical anion. Both the vertical detachment energy (VDE) and adiabatic electron affinity (AEA) of uracil are predicted to increase gradually with the number of hydrating molecules, qualitatively consistent with experimental results from a photodetachment-photoelectron spectroscopy study [J. Schiedt , Chem. Phys. 239, 511 (1998)]. The trend in the AEAs implies that while the conventional valence radical anion of uracil is only marginally bound in the gas phase, it will form a stable anion in aqueous solution. The gas-phase AEA of uracil (0.24 eV) was higher than that of thymine by 0.04 eV and this gap was not significantly affected by microsolvation. The largest AEA is that predicted for uracil center dot(H2O)(5), namely, 0.96 eV. The VDEs range from 0.76 to 1.78 eV. (c) 2006 American Institute of Physics.
引用
收藏
页数:9
相关论文
共 44 条
[41]   Electron affinities and ionization potentials of nucleotide bases [J].
Wetmore, SD ;
Boyd, RJ ;
Eriksson, LA .
CHEMICAL PHYSICS LETTERS, 2000, 322 (1-2) :129-135
[42]   THE DETERMINATION OF ABSOLUTE ELECTRON-AFFINITIES OF THE PURINES AND PYRIMIDINES IN DNA AND RNA FROM REVERSIBLE REDUCTION POTENTIALS [J].
WILEY, JR ;
ROBINSON, JM ;
EHDAIE, S ;
CHEN, ECM ;
CHEN, ESD ;
WENTWORTH, WE .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1991, 180 (02) :841-845
[43]   The experimental hardness and electronegativity of the purines and pyrimidines in DNA and RNA supported by the AM1 calculation of the electron affinities and ionization potentials [J].
Zhang, Q ;
Chen, ECM .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1995, 217 (03) :755-760
[44]   Studies of the solvent effects on the internal reorganization energy for electron transfer of uracil and its anion with ONIOM [J].
Zhang, RB ;
Zhang, XD ;
Qu, ZW ;
Ai, XC ;
Zhang, XK ;
Zhang, QY .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2003, 624 :169-176