A computational study of cation-π interactions vs salt bridges in aqueous media:: Implications for protein engineering

被引:380
作者
Gallivan, JP [1 ]
Dougherty, DA [1 ]
机构
[1] CALTECH, Div Chem & Chem Engn, Pasadena, CA 91125 USA
关键词
D O I
10.1021/ja991755c
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
A direct comparison of the energetic significance of a representative salt bridge vs a representative cation-pi interaction in aqueous media and in a range of organic solvents is presented using ab initio electronic structures and the SM5.42R/HF solvation model of Cramer and Truhlar. The cation-pi interaction shows a well depth of 5.5 kcal/mol in water, significantly larger than the 2.2 kcal/mol seen for the salt bridge. Consistent with this idea, a survey of the Protein Data Bank reveals that energetically significant cation-pi interactions are rarely completely buried within proteins, but prefer to be exposed to solvent. These results suggest that engineering surface-exposed cation-pi interactions could be a novel way to enhance protein stability.
引用
收藏
页码:870 / 874
页数:5
相关论文
共 47 条
[31]   The cation-pi interaction [J].
Ma, JC ;
Dougherty, DA .
CHEMICAL REVIEWS, 1997, 97 (05) :1303-1324
[32]   TRANSIENT FOLDING INTERMEDIATES CHARACTERIZED BY PROTEIN ENGINEERING [J].
MATOUSCHEK, A ;
KELLIS, JT ;
SERRANO, L ;
BYCROFT, M ;
FERSHT, AR .
NATURE, 1990, 346 (6283) :440-445
[33]   The hyperthermostable indoleglycerol phosphate synthase from Thermotoga maritima is destabilized by mutational disruption of two solvent-exposed salt bridges [J].
Merz, A ;
Knöchel, T ;
Jansonius, JN ;
Kirschner, K .
JOURNAL OF MOLECULAR BIOLOGY, 1999, 288 (04) :753-763
[34]   Stability of like and oppositely charged organic ion pairs in aqueous solution [J].
No, KT ;
Nam, KY ;
Scheraga, HA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1997, 119 (52) :12917-12922
[35]   HYDROPHOBICITY OF AMINO-ACID RESIDUES IN GLOBULAR-PROTEINS [J].
ROSE, GD ;
GESELOWITZ, AR ;
LESSER, GJ ;
LEE, RH ;
ZEHFUS, MH .
SCIENCE, 1985, 229 (4716) :834-838
[36]   CONSERVATION AND PREDICTION OF SOLVENT ACCESSIBILITY IN PROTEIN FAMILIES [J].
ROST, B ;
SANDER, C .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 1994, 20 (03) :216-226
[37]   Monte Carlo simulations of guanidinium acetate and methylammonium acetate ion pairs in water [J].
Saigal, S ;
Pranata, J .
BIOORGANIC CHEMISTRY, 1997, 25 (01) :11-21
[38]   SURFACE ELECTROSTATIC INTERACTIONS CONTRIBUTE LITTLE TO STABILITY OF BARNASE [J].
SALI, D ;
BYCROFT, M ;
FERSHT, AR .
JOURNAL OF MOLECULAR BIOLOGY, 1991, 220 (03) :779-788
[39]   HOST-GUEST SUPRAMOLECULAR CHEMISTRY .34. THE INCREMENTAL APPROACH TO NONCOVALENT INTERACTIONS - COULOMB AND VANDERWAALS EFFECTS IN ORGANIC ION-PAIRS [J].
SCHNEIDER, HJ ;
SCHIESTEL, T ;
ZIMMERMANN, P .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (20) :7698-7703
[40]   A designed buried salt bridge in a heterodimeric coiled coil [J].
Schneider, JP ;
Lear, JD ;
DeGrado, WF .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1997, 119 (24) :5742-5743