NMR assignments for a helical 40 kDa membrane protein

被引:66
作者
Oxenoid, K
Kirn, HJ
Jacob, J
Sönnichsen, FD
Sanders, CR [1 ]
机构
[1] Vanderbilt Univ, Dept Biochem, Nashville, TN 37232 USA
[2] Vanderbilt Univ, Ctr Struct Biol, Nashville, TN 37232 USA
[3] Case Western Reserve Univ, Dept Physiol & Biophys, Cleveland, OH 44106 USA
关键词
D O I
10.1021/ja049916m
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Backbone nuclear magnetic resonance (NMR) assignments were achieved for diacylglycerol kinase (DAGK) in detergent micelles. DAGK is a homotrimeric integral membrane protein comprised of 121 residue subunits, each having three transmembrane segments. Assignments were made using TROSY-based pulse sequences. DAGK was found to be an almost exclusively helical protein. This work points to the feasibility of both solving the structure of DAGK using solution NMR methods and using NMR as a primary tool in structural studies of other helical integral membrane proteins of similar size and complexity. Copyright © 2003 American Chemical Society.
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页码:5048 / 5049
页数:2
相关论文
共 28 条
[1]   Structure of outer membrane protein A transmembrane domain by NMR spectroscopy [J].
Arora, A ;
Abildgaard, F ;
Bushweller, JH ;
Tamm, LK .
NATURE STRUCTURAL BIOLOGY, 2001, 8 (04) :334-338
[2]   SEQUENCE-SPECIFIC H-1-NMR ASSIGNMENT AND CONFORMATION OF PROTEOLYTIC FRAGMENT 163-231 OF BACTERIOOPSIN [J].
BARSUKOV, IL ;
ABDULAEVA, GV ;
ARSENIEV, AS ;
BYSTROV, VF .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1990, 192 (02) :321-327
[3]   A simple apparatus for generating stretched polyacrylamide gels, yielding uniform alignment of proteins and detergent micelles [J].
Chou, JJ ;
Gaemers, S ;
Howder, B ;
Louis, JM ;
Bax, A .
JOURNAL OF BIOMOLECULAR NMR, 2001, 21 (04) :377-382
[4]   NMR solution structure determination of membrane proteins reconstituted in detergent micelles [J].
Fernández, C ;
Wüthrich, K .
FEBS LETTERS, 2003, 555 (01) :144-150
[5]   TROSY in NMR studies of the structure and function of large biological macromolecules [J].
Fernández, C ;
Wider, G .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2003, 13 (05) :570-580
[6]   The use of 2H, 13C, 15N multidimensional NMR to study the structure and dynamics of proteins [J].
Gardner, KH ;
Kay, LE .
ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE, 1998, 27 :357-406
[7]   Solution structure of the transmembrane H+-transporting subunit c of the F1F0 ATP synthase [J].
Girvin, ME ;
Rastogi, VK ;
Abildgaard, F ;
Markley, JL ;
Fillingame, RH .
BIOCHEMISTRY, 1998, 37 (25) :8817-8824
[8]  
GRABCHUCK IA, 1996, PHARM ACTA HELV, V71, P87
[9]   Solution structure and dynamics of the outer membrane enzyme PagP by NMR [J].
Hwang, PM ;
Choy, WY ;
Lo, EI ;
Chen, L ;
Forman-Kay, JD ;
Raetz, CRH ;
Privé, GG ;
Bishop, RE ;
Kay, LE .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (21) :13560-13565
[10]   A method for assessing the stability of a membrane protein [J].
Lau, FW ;
Bowie, JU .
BIOCHEMISTRY, 1997, 36 (19) :5884-5892