Dynamics of ATP-binding cassette contribute to allosteric control, nucleotide binding and energy transduction in ABC transporters

被引:60
作者
Wang, CY
Karpowich, N
Hunt, JF
Rance, M
Palmer, AG
机构
[1] Columbia Univ, Dept Biochem & Mol Biophys, New York, NY 10032 USA
[2] Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
[3] Univ Cincinnati, Coll Med, Dept Mol Genet Biochem & Microbiol, Cincinnati, OH 45267 USA
关键词
NMR; dynamics; allosteric regulation; ABC; ATP-binding cassette;
D O I
10.1016/j.jmb.2004.07.001
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
ATP-binding cassette (ABC) transporters move solutes across membranes and are associated with important diseases, including cystic fibrosis and multi-drug resistance. These molecular machines are energized by their charateristic ABC modules, molecular engines fuelled by ATP hydrolysis. A solution NMR study of a model ABC, Methanococcus jannaschii protein MJ1267, reveals that ADP-Mg binding alters the flexibilities of key ABC motifs and induces allosteric changes in conformational dynamics in the LivG insert, over 30 A away from the ATPase active site. N-15 spin relaxation data support a "selected-fit" model for nucleotide binding. Transitions between rigidity and flexibility in key motifs during the ATP hydrolysis cycle may be crucial to mechanochemical energy transduction in ABC transporters. The restriction of correlated protein motions is likely a central mechanism for allosteric communications. Comparison between dynamics data from NMR and X-ray crystallography reveals their overall consistency and complementarity. (C) 2004 Elsevier Ltd. All rights reserved.
引用
收藏
页码:525 / 537
页数:13
相关论文
共 58 条
[11]   BACKBONE DYNAMICS OF A FREE AND A PHOSPHOPEPTIDE-COMPLEXED SRC HOMOLOGY-2 DOMAIN STUDIED BY N-15 NMR RELAXATION [J].
FARROW, NA ;
MUHANDIRAM, R ;
SINGER, AU ;
PASCAL, SM ;
KAY, CM ;
GISH, G ;
SHOELSON, SE ;
PAWSON, T ;
FORMANKAY, JD ;
KAY, LE .
BIOCHEMISTRY, 1994, 33 (19) :5984-6003
[12]   SPECTRAL DENSITY-FUNCTION MAPPING USING N-15 RELAXATION DATA EXCLUSIVELY [J].
FARROW, NA ;
ZHANG, OW ;
SZABO, A ;
TORCHIA, DA ;
KAY, LE .
JOURNAL OF BIOMOLECULAR NMR, 1995, 6 (02) :153-162
[13]   Millisecond-timescale motions contribute to the function of the bacterial response regulator protein Spo0F [J].
Feher, VA ;
Cavanagh, J .
NATURE, 1999, 400 (6741) :289-293
[14]   The NMR solution structure of BeF3--activated Spo0F reveals the conformational switch in a phosphorelay system [J].
Gardino, AK ;
Volkman, BF ;
Cho, HS ;
Lee, SY ;
Wemmer, DE ;
Kern, D .
JOURNAL OF MOLECULAR BIOLOGY, 2003, 331 (01) :245-254
[15]  
HIGGINS CF, 1992, ANNU REV CELL BIOL, V8, P67, DOI 10.1146/annurev.cb.08.110192.000435
[16]   THE ABC OF CHANNEL REGULATION [J].
HIGGINS, CF .
CELL, 1995, 82 (05) :693-696
[17]   A FAMILY OF RELATED ATP-BINDING SUBUNITS COUPLED TO MANY DISTINCT BIOLOGICAL PROCESSES IN BACTERIA [J].
HIGGINS, CF ;
HILES, ID ;
SALMOND, GPC ;
GILL, DR ;
DOWNIE, JA ;
EVANS, IJ ;
HOLLAND, IB ;
GRAY, L ;
BUCKEL, SD ;
BELL, AW ;
HERMODSON, MA .
NATURE, 1986, 323 (6087) :448-450
[18]   Structural biology of Rad50 ATPase: ATP-driven conformational control in DNA double-strand break repair and the ABC-ATPase superfamily [J].
Hopfner, KP ;
Karcher, A ;
Shin, DS ;
Craig, L ;
Arthur, LM ;
Carney, JP ;
Tainer, JA .
CELL, 2000, 101 (07) :789-800
[19]   Rad50/SMC proteins and ABC transporters: unifying concepts from high-resolution structures [J].
Hopfner, KP ;
Tainer, JA .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2003, 13 (02) :249-255
[20]   Crystal structure of the ATP-binding subunit of an ABC transporter [J].
Hung, LW ;
Wang, IXY ;
Nikaido, K ;
Liu, PQ ;
Ames, GFL ;
Kim, SH .
NATURE, 1998, 396 (6712) :703-707