PLMItRNA, a database for tRNAs and tRNA genes in plant mitochondria: enlargement and updating

被引：3

作者：

Volpetti, V

Gallerani, R

De Benedetto, C

Liuni, S

Licciulli, F

Ceci, LR

机构：

[1] Univ Bari, Dipartmento Biochim & Biol Mol, I-70126 Bari, Italy

[2] CNR, Ctr Studio Mitocondri & Metab Energet, I-70126 Bari, Italy

[3] CNR, Area Ric, I-70126 Bari, Italy

来源：

NUCLEIC ACIDS RESEARCH | 2000年 / 28卷 / 01期

关键词：

D O I：

10.1093/nar/28.1.159

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The current version of PLMItRNA has been realized to constitute a database for tRNA molecules and genes identified in the mitochondria of all green plants (Viridiplantae), It is the enlargement of a previous database originally restricted to seed plants [Ceci,L.R., Volpicella, M., Liuni,S., Volpetti, V., Licciulli, F. and Gallerani, R. (1999) Nucleic Acids Res., 27, 156-157]. PLMItRNP, reports information and multialignments on 254 genes and 16 tRNA molecules detected in 25 higher plants (one bryophyta and 24 vascular plants) and seven green algae. PLMItRNA is accessible via the WWW at http://bio-WWW.ba.cnr.it:8000/srs6/.

引用

收藏

页码：159 / 162

页数：4

相关论文

共 19 条

[1] Occurrence of nuclear-encoded tRNA(IIe) in mitochondria of the liverwort Marchantia polymorpha [J].

Akashi, K ;

Sakurai, K ;

Hirayama, J ;

Fukuzawa, H ;

Ohyama, K .

CURRENT GENETICS, 1996, 30 (02) :181-185

[2] Coexistence of nuclear DNA-encoded tRNAVal(AAC) and mitochondrial DNA-encoded tRNAVal(UAC) in mitochondria of a liverwort Marchantia polymorpha [J].

Akashi, K ;

Takenaka, M ;

Yamaoka, S ;

Suyama, Y ;

Fukuzawa, H ;

Ohyama, K .

NUCLEIC ACIDS RESEARCH, 1998, 26 (09) :2168-2172

[3] Accumulation of nuclear-encoded tRNA(Thr)(AGU) in mitochondria of the liverwort Marchantia polymorpha [J].

Akashi, K ;

Hirayama, J ;

Takenaka, M ;

Yamaoka, S ;

Suyama, Y ;

Fukuzawa, H ;

Ohyama, K .

BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION, 1997, 1350 (03) :262-266

[4] PLMItRNA, a database for higher plant mitochondrial tRNAs and tRNA genes [J].

Ceci, LR ;

Volpicella, M ;

Liuni, S ;

Volpetti, V ;

Licciulli, F ;

Gallerani, R .

NUCLEIC ACIDS RESEARCH, 1999, 27 (01) :156-157

[5] Complete sequence of the mitochondrial DNA of Chlamydomonas eugametos [J].

Denovan-Wright , EM ;

Nedelcu, AM ;

Lee, RW .

PLANT MOLECULAR BIOLOGY, 1998, 36 (02) :285-295

[6] Editing and import: Strategies for providing plant mitochondria with a complete set of functional transfer RNAs [J].

Dietrich, A ;

Small, I ;

Cosset, A ;

Weil, JH ;

MarechalDrouard, L .

BIOCHIMIE, 1996, 78 (06) :518-529

[7]

GOUY M, 1985, COMPUT APPL BIOSCI, V1, P167

[8] A PHASEOLUS-VULGARIS MITOCHONDRIAL TRANSFER RNALEU IS IDENTICAL TO ITS CYTOPLASMIC COUNTERPART - SEQUENCING AND INVIVO TRANSCRIPTION OF THE GENE CORRESPONDING TO THE CYTOPLASMIC TRANSFER RNALEU [J].

GREEN, GA ;

MARECHAL, L ;

WEIL, JH ;

GUILLEMAUT, P .

PLANT MOLECULAR BIOLOGY, 1987, 10 (01) :13-19

[9] The mitochondrial genome of Chlorogonium elongatum inferred from the complete sequence [J].

Kroymann, J ;

Zetsche, K .

JOURNAL OF MOLECULAR EVOLUTION, 1998, 47 (04) :431-440

[10] COMPLETE SEQUENCE OF THE MITOCHONDRIAL-DNA OF THE RHODOPHYTE CHONDRUS-CRISPUS (GIGARTINALES) - GENE CONTENT AND GENOME ORGANIZATION [J].

LEBLANC, C ;

BOYEN, C ;

RICHARD, O ;

BONNARD, G ;

GRIENENBERGER, JM ;

KLOAREG, B .

JOURNAL OF MOLECULAR BIOLOGY, 1995, 250 (04) :484-495