High throughput detection of retrovirus-associated reverse transcriptase using an improved fluorescent product enhanced reverse transcriptase assay and its comparison to conventional detection methods

被引:68
作者
Lovatt, A [1 ]
Black, J [1 ]
Galbraith, D [1 ]
Doherty, I [1 ]
Moran, MW [1 ]
Shepherd, AJ [1 ]
Griffen, A [1 ]
Bailey, A [1 ]
Wilson, N [1 ]
Smith, KT [1 ]
机构
[1] Q One Biotech Ltd, Glasgow G20 0XA, Lanark, Scotland
关键词
retrovirus; product enhanced reverse transcriptase assay; PBRT; TaqMan PCR; calf thymus DNA; DNA polymerase; xenotransplantation;
D O I
10.1016/S0166-0934(99)00111-1
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The development and application of a novel, sensitive TaqMan fluorescent probe-based product enhanced RT test (F-PERT) for the detection of retrovirus are described. The assay allows discrimination between the amplification signals generated by genuine positive signals that result from retroviral RT activity and the RT-like activity from DNA polymerases. The RT-like activity from DNA polymerases was suppressed by the addition of activated calf-thymus DNA with no reduction in the RT activity. A linear relationship between threshold cycle (C-T) and the number of virus particles was demonstrated, allowing quantification of retroviruses in unknown samples. The F-PERT assay was able to detect a wide range of retroviral RT activities, including that from porcine endogenous retrovirus (PoERV), murine leukaemia virus (MLV), simian foamy virus (SFV), simian immunodeficiency virus (SIVmac) and squirrel monkey retrovirus (SMRV). The detection limit of SMRV, MLV and PoERV was approximately 100 virion particles and the test was able to detect at least 10(2) molecules of purified RT enzyme. RT activity was not detected in cellular lysates and supernatants from MRC-5, BT, VERO, or Raji cells, whereas RT activity was detected in C127I, Mus dunni. K-Balb, BHK-21, CHO-K1, SP2/0-Ag14 and NSO cell supernatants. RT activity was also detected in the Spodoptera cell line Sf9. (C) 1999 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:185 / 200
页数:16
相关论文
共 55 条
[11]  
2-M
[12]   Development of an improved product enhanced reverse transcriptase assay [J].
Chang, A ;
Ostrove, JM ;
Bird, RE .
JOURNAL OF VIROLOGICAL METHODS, 1997, 65 (01) :45-54
[13]   Novel retroviral sequences are expressed in the epididymis and uterus of Syrian hamsters [J].
DeHaven, JE ;
Schwartz, DA ;
Dahm, MW ;
Hazard, ES ;
Trifiletti, R ;
Lacy, ER ;
Norris, JS .
JOURNAL OF GENERAL VIROLOGY, 1998, 79 :2687-2694
[14]  
DINOWITZ M, 1992, DEV BIOLOGICALS, V76, P201
[15]   Rapid detection of the Chlamydiaceae and other families in the order Chlamydiales:: Three PCR tests [J].
Everett, KDE ;
Hornung, LJ ;
Andersen, AA .
JOURNAL OF CLINICAL MICROBIOLOGY, 1999, 37 (03) :575-580
[16]  
GABRIEL A, 1993, REVERSE TRANSCRIPTAS
[17]   Proteolytic processing and assembly of gag and gag-pol proteins of TED, a baculovirus-associated retrotransposon of the gypsy family [J].
Hajek, K ;
Friesen, PD .
JOURNAL OF VIROLOGY, 1998, 72 (11) :8718-8724
[18]   Real time quantitative PCR [J].
Heid, CA ;
Stevens, J ;
Livak, KJ ;
Williams, PM .
GENOME RESEARCH, 1996, 6 (10) :986-994
[19]   DETECTION OF REVERSE-TRANSCRIPTASE BY A HIGHLY SENSITIVE ASSAY IN SERA FROM PERSONS INFECTED WITH HUMAN-IMMUNODEFICIENCY-VIRUS TYPE-1 [J].
HENEINE, W ;
YAMAMOTO, S ;
SWITZER, WM ;
SPIRA, TJ ;
FOLKS, TM .
JOURNAL OF INFECTIOUS DISEASES, 1995, 171 (05) :1210-1216
[20]   5′ nuclease PCR assay to detect Yersinia pestis [J].
Higgins, JA ;
Ezzell, J ;
Hinnebusch, BJ ;
Shipley, M ;
Henchal, EA ;
Ibrahim, MS .
JOURNAL OF CLINICAL MICROBIOLOGY, 1998, 36 (08) :2284-2288