Differential behavior of curved DNA upon untwisting

被引:14
作者
Brukner, I [1 ]
Belmaaza, A [1 ]
Chartrand, P [1 ]
机构
[1] UNIV MONTREAL,INST CANC MONTREAL,CTR RECH LOUIS CHARLES SIMARD,MONTREAL,PQ H2L 4M1,CANADA
关键词
D O I
10.1073/pnas.94.2.403
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We have synthesized DNA segments with different handedness, twisting and radii of curvature, and have analyzed the effect of untwisting on them. The results indicate that the dynamic behavior of curved DNA upon untwisting is strongly determined by the initial sequence-dependent DNA trajectory. In particular, DNA with the same radii but with opposite handedness of superhelix twisting can show very different conformational responses to ethidium bromide untwisting. Upon treatment with ethidium bromide, right-handed superhelixes decrease their twist and increase the planarity of the superhelix, while left-handed superhelixes increase twisting and decrease their degree of planarity.
引用
收藏
页码:403 / 406
页数:4
相关论文
共 48 条
  • [1] [Anonymous], DNA TOPOLOGY ITS BIO
  • [2] DETERMINATION OF DNA PERSISTENCE LENGTH BY CRYOELECTRON MICROSCOPY - SEPARATION OF THE STATIC AND DYNAMIC CONTRIBUTIONS TO THE APPARENT PERSISTENCE LENGTH OF DNA
    BEDNAR, J
    FURRER, P
    KATRITCH, V
    STASIAK, AZ
    DUBOCHET, J
    STASIAK, A
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1995, 254 (04) : 579 - 591
  • [3] SEQUENCE-DEPENDENT BENDING PROPENSITY OF DNA AS REVEALED BY DNASE-I - PARAMETERS FOR TRINUCLEOTIDES
    BRUKNER, I
    SANCHEZ, R
    SUCK, D
    PONGOR, S
    [J]. EMBO JOURNAL, 1995, 14 (08) : 1812 - 1818
  • [4] EVIDENCE FOR OPPOSITE GROOVE-DIRECTED CURVATURE OF GGGCCC AND AAAAA SEQUENCE ELEMENTS
    BRUKNER, I
    DLAKIC, M
    SAVIC, A
    SUSIC, S
    PONGOR, S
    SUCK, D
    [J]. NUCLEIC ACIDS RESEARCH, 1993, 21 (04) : 1025 - 1029
  • [5] THE INTRINSIC CURVATURE OF DNA IN SOLUTION
    CALLADINE, CR
    DREW, HR
    MCCALL, MJ
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1988, 201 (01) : 127 - 137
  • [6] A useful role for ''static'' models in elucidating the behaviour of DNA in solution
    Calladine, CR
    Drew, HR
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1996, 257 (03) : 479 - 485
  • [7] CALLADINE CR, 1992, UNDERSTANDING DNA MO
  • [8] CROTHERS DM, 1992, METHOD ENZYMOL, V212, P3
  • [9] MPD and DNA bending in crystals and in solution
    Dickerson, RE
    Goodsell, D
    Kopka, ML
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1996, 256 (01) : 108 - 125
  • [10] DICKERSON RE, 1992, METHOD ENZYMOL, V211, P67