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Ab initio study of the ionization of the DNA bases:: Ionization potentials and excited states of the cations
被引:63
作者:
Cauet, Emilie
Dehareng, Dominique
Lievin, Jacques
机构:
[1] Free Univ Brussels, Serv Chim Quant & Photophys, B-1050 Brussels, Belgium
[2] Univ Liege, Ctr Ingn Prot, B-4000 Liege 1, Belgium
关键词:
D O I:
10.1021/jp0617625
中图分类号:
O64 [物理化学(理论化学)、化学物理学];
学科分类号:
070304 ;
081704 ;
摘要:
The ionization of the four DNA bases is investigated by means of ab initio calculations. Accurate values of the gas-phase vertical and adiabatic ionization potentials (IP) are obtained at the MP2/6-31G(2d(0.8, alpha(d)), p) level of theory. The need of introducing extra polarization to the standard 6-31G(d, p) basis set is demonstrated by test calculations and an optimal value of alpha(d) = 0.1 is obtained. Ionization to electronically excited radical cations is also considered. The low-lying excited states of the cations are characterized for the first time. The topology of the corresponding potential energy surfaces is qualitatively described in terms of the stationary points ( minima and saddle points) located on these surfaces. A conical intersection is characterized for the first time on the ground-state potential energy surface of all cations. It arises from the crossing of the adiabatic surfaces of the ground and first excited state at planar geometries. A nonplanar minimum is observed for the cytosine cation only. The geometry and electronic changes occurring along these surfaces are analyzed, leading to a comparison between the different nucleobase cations. The study of larger ionized systems related to DNA is rendered possible thanks to the optimized medium size basis set proposed in this work, as exemplified by the calculation of the IP of a stacked dimer of guanines.
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页码:9200 / 9211
页数:12
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