Methods of studying soil microbial diversity

被引：615

作者：

Kirk, JL

Beaudette, LA

Hart, M

Moutoglis, P

Khironomos, JN

Lee, H

Trevors, JT ^{[1
]}

机构：

[1] Univ Guelph, Ontario Agr Coll, Dept Environm Biol, Guelph, ON N1G 2W1, Canada

[2] Univ Guelph, Dept Bot, Guelph, ON N1G 2W1, Canada

[3] PremierTech, Riviere Du Loup, PQ G5R 6C1, Canada

来源：

JOURNAL OF MICROBIOLOGICAL METHODS | 2004年 / 58卷 / 02期

基金：

加拿大自然科学与工程研究理事会;

关键词：

arbuscular mycorrhizal fungi (AMF); bacteria; biology; diversity; DNA; ecology; fungi; molecular ecology; soil;

D O I：

10.1016/j.mimet.2004.04.006

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Soil microorganisms, such as bacteria and fungi, play central roles in soil fertility and promoting plant health. This review examines and compares the various methods used to study microbial diversity in soil. (C) 2004 Elsevier B.V. All rights reserved.

引用

收藏

页码：169 / 188

页数：20

相关论文

共 140 条

[91] Molecular and functional diversity in soil micro-organisms [J].

Prosser, JI .

PLANT AND SOIL, 2002, 244 (1-2) :9-17

[92] Sequencing bands of ribosomal intergenic spacer analysis fingerprints for characterization and microscale distribution of soil bacterium populations responding to mercury spiking [J].

Ranjard, L ;

Brothier, E ;

Nazaret, S .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (12) :5334-5339

[93] Specific PGR primers to identify arbuscular mycorrhizal fungi within colonized roots [J].

Redecker, D .

MYCORRHIZA, 2000, 10 (02) :73-80

[94] Ancestral lineages of arbuscular mycorrhizal fungi (Glomales) [J].

Redecker, D ;

Morton, JB ;

Bruns, TD .

MOLECULAR PHYLOGENETICS AND EVOLUTION, 2000, 14 (02) :276-284

[95] Phylogenetic analysis of a dataset of fungal 5.8S rDNA sequences shows that highly divergent copies of internal transcribed spacers reported from Scutellospora castanea are of ascomycete origin [J].

Redecker, D ;

Hijri, M ;

Dulieu, H ;

Sanders, IR .

FUNGAL GENETICS AND BIOLOGY, 1999, 28 (03) :238-244

[96] Restriction analysis of PCR-amplified internal transcribed spacers of ribosomal DNA as a tool for species identification in different genera of the order glomales [J].

Redecker, D ;

Thierfelder, H ;

Walker, C ;

Werner, D .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (05) :1756-1761

[97]

Röling WFM, 2000, MICROBIAL ECOL, V40, P177

[98] The Earth's bounty: assessing and accessing soil microbial diversity [J].

Rondon, MR ;

Goodman, RM ;

Handelsman, J .

TRENDS IN BIOTECHNOLOGY, 1999, 17 (10) :403-409

[99] Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms [J].

Rondon, MR ;

August, PR ;

Bettermann, AD ;

Brady, SF ;

Grossman, TH ;

Liles, MR ;

Loiacono, KA ;

Lynch, BA ;

MacNeil, IA ;

Minor, C ;

Tiong, CL ;

Gilman, M ;

Osburne, MS ;

Clardy, J ;

Handelsman, J ;

Goodman, RM .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (06) :2541-2547

[100] THE ECOLOGY AND FUNCTIONING OF VESICULAR ARBUSCULAR MYCORRHIZAS IN COEXISTING GRASSLAND SPECIES .1. SEASONAL PATTERNS OF MYCORRHIZAL OCCURRENCE AND MORPHOLOGY [J].

SANDERS, IR ;

FITTER, AH .

NEW PHYTOLOGIST, 1992, 120 (04) :517-524

← 5 6 7 8 9 10 11 12 13 14 →