Gene expression phenotype in heterozygous carriers of ataxia telangiectasia

被引:38
作者
Watts, JA
Morley, M
Burdick, JT
Fiori, JL
Ewens, WJ
Spielman, RS
Cheung, VG
机构
[1] Univ Penn, Dept Pediat, Philadelphia, PA 19104 USA
[2] Univ Penn, Dept Genet, Philadelphia, PA 19104 USA
[3] Univ Penn, Dept Biol, Philadelphia, PA 19104 USA
[4] Childrens Hosp Philadelphia, Philadelphia, PA 19104 USA
关键词
D O I
10.1086/342974
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The defining characteristic of recessive diseases is the absence of a phenotype in the heterozygous carriers. Nonetheless, subtle manifestations may be detectable by new methods, such as expression profiling. Ataxia telangiectasia (AT) is a typical recessive disease, and individual carriers cannot be reliably identified. As a group, however, carriers of an AT disease allele have been reported to have a phenotype that distinguishes them from normal control individuals: increased radiosensitivity and risk of cancer. We show here that the phenotype is also detectable, in lymphoblastoid cells from AT carriers, as changes in expression level of many genes. The differences are manifested both in baseline expression levels and in response to ionizing radiation. Our findings show that carriers of a recessive disease may have an "expression phenotype." In the particular case of AT, this suggests a new approach to the identification of carriers and enhances understanding of their increased cancer risk. More generally, we demonstrate that genomic technologies offer the opportunity to identify and study unaffected carriers, who are hundreds of times more common than affected patients.
引用
收藏
页码:791 / 800
页数:10
相关论文
共 35 条
[1]   Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling [J].
Alizadeh, AA ;
Eisen, MB ;
Davis, RE ;
Ma, C ;
Lossos, IS ;
Rosenwald, A ;
Boldrick, JG ;
Sabet, H ;
Tran, T ;
Yu, X ;
Powell, JI ;
Yang, LM ;
Marti, GE ;
Moore, T ;
Hudson, J ;
Lu, LS ;
Lewis, DB ;
Tibshirani, R ;
Sherlock, G ;
Chan, WC ;
Greiner, TC ;
Weisenburger, DD ;
Armitage, JO ;
Warnke, R ;
Levy, R ;
Wilson, W ;
Grever, MR ;
Byrd, JC ;
Botstein, D ;
Brown, PO ;
Staudt, LM .
NATURE, 2000, 403 (6769) :503-511
[2]   Gene Ontology: tool for the unification of biology [J].
Ashburner, M ;
Ball, CA ;
Blake, JA ;
Botstein, D ;
Butler, H ;
Cherry, JM ;
Davis, AP ;
Dolinski, K ;
Dwight, SS ;
Eppig, JT ;
Harris, MA ;
Hill, DP ;
Issel-Tarver, L ;
Kasarskis, A ;
Lewis, S ;
Matese, JC ;
Richardson, JE ;
Ringwald, M ;
Rubin, GM ;
Sherlock, G .
NATURE GENETICS, 2000, 25 (01) :25-29
[3]   Molecular genotyping shows that ataxia-telangiectasia heterozygotes are predisposed to breast cancer [J].
Athma, P ;
Rappaport, R ;
Swift, M .
CANCER GENETICS AND CYTOGENETICS, 1996, 92 (02) :130-134
[4]   Atm haploinsufficiency results in increased sensitivity to sublethal doses of ionizing radiation in mice [J].
Barlow, C ;
Eckhaus, MA ;
Schäffer, AA ;
Wynshaw-Boris, A .
NATURE GENETICS, 1999, 21 (04) :359-360
[5]   Ataxia-telangiectasia: Phenotype/genotype studies of ATM protein expression, mutations, and radiosensitivity [J].
Becker-Catania, SG ;
Chen, G ;
Hwang, MJ ;
Wang, ZJ ;
Sun, X ;
Sanal, O ;
Bernatowska-Matuszkiewicz, E ;
Chessa, L ;
Lee, EYHP ;
Gatti, RA .
MOLECULAR GENETICS AND METABOLISM, 2000, 70 (02) :122-133
[6]   Molecular classification of cutaneous malignant melanoma by gene expression profiling [J].
Bittner, M ;
Meitzer, P ;
Chen, Y ;
Jiang, Y ;
Seftor, E ;
Hendrix, M ;
Radmacher, M ;
Simon, R ;
Yakhini, Z ;
Ben-Dor, A ;
Sampas, N ;
Dougherty, E ;
Wang, E ;
Marincola, F ;
Gooden, C ;
Lueders, J ;
Glatfelter, A ;
Pollock, P ;
Carpten, J ;
Gillanders, E ;
Leja, D ;
Dietrich, K ;
Beaudry, C ;
Berens, M ;
Alberts, D ;
Sondak, V ;
Hayward, N ;
Trent, J .
NATURE, 2000, 406 (6795) :536-540
[7]   ATM-heterozygous germline mutations contribute to breast cancer-susceptibility [J].
Broeks, A ;
Urbanus, JHM ;
Floore, AN ;
Dahler, EC ;
Klijn, JGM ;
Rutgers, EJT ;
Devilee, P ;
Russell, NS ;
van Leeuwen, FE ;
van't Veer, LJ .
AMERICAN JOURNAL OF HUMAN GENETICS, 2000, 66 (02) :494-500
[8]   Microarray expression profiling identifies genes with altered expression in HDL-deficient mice [J].
Callow, MJ ;
Dudoit, S ;
Gong, EL ;
Speed, TP ;
Rubin, EM .
GENOME RESEARCH, 2000, 10 (12) :2022-2029
[9]  
Chen JD, 1998, CANCER RES, V58, P1376
[10]  
Concannon P, 1997, HUM MUTAT, V10, P100, DOI 10.1002/(SICI)1098-1004(1997)10:2<100::AID-HUMU2>3.3.CO