Concordance of genetic and fin photo identification in the great white shark, Carcharodon carcharias, off Mossel Bay, South Africa

被引:37
作者
Gubili, Chrysoula [1 ,2 ]
Johnson, Ryan [3 ,4 ]
Gennari, Enrico [4 ]
Oosthuizen, W. Hermann [5 ]
Kotze, Deon [5 ]
Meyer, Mike [5 ]
Sims, David W. [2 ]
Jones, Catherine S. [1 ]
Noble, Leslie Robert [1 ]
机构
[1] Univ Aberdeen, Inst Environm & Biol Sci, Aberdeen AB24 2TZ, Scotland
[2] Marine Biol Assoc United Kingdom Lab, Plymouth PL1 2PB, Devon, England
[3] Univ Pretoria, Dept Zool & Entomol, Mammal Res Inst, ZA-0002 Pretoria, South Africa
[4] Oceans Res, ZA-6500 Mossel Bay, South Africa
[5] Branch Marine & Coastal Management, Dept Environm Affairs & Tourism, Cape Town, South Africa
关键词
RHINCODON-TYPUS; PHOTOGRAPHIC IDENTIFICATION; INDIVIDUAL IDENTIFICATION; COMPUTER-PROGRAM; NATURAL MARKS; NINGALOO-REEF; WHALES; PHOTOIDENTIFICATION; MOVEMENTS; CONSERVATION;
D O I
10.1007/s00227-009-1233-y
中图分类号
Q17 [水生生物学];
学科分类号
071004 ;
摘要
Visual identification of naturally acquired marks has been a popular if subjective method of animal identification and population estimation over the last 40 years. Molecular genetics has also independently developed objective individual marking techniques during the same period. Here, we assess the concordance of individual great white shark (Carcharodon carharias) dorsal fin recognition and identification, using seven microsatellite loci as the independent unbiased arbiter, over a period of 5 years. As a monitoring technique, fin photographs offer a very good individual identification key for white sharks over a relatively short period of time (5 years), matching with genetic data in about 85% of cases, whilst caution and a continuously updated database is required for animal recognition over a longer period.
引用
收藏
页码:2199 / 2207
页数:9
相关论文
共 53 条
[41]   Isolation and characterization of dinucleotide microsatellite loci in the Great White Shark, Carcharodon carcharias [J].
Pardini, AT ;
Jones, CS ;
Scholl, MC ;
Noble, LR .
MOLECULAR ECOLOGY, 2000, 9 (08) :1176-1178
[42]   GENEPOP′007:: a complete re-implementation of the GENEPOP software for Windows and Linux [J].
Rousset, Francois .
MOLECULAR ECOLOGY RESOURCES, 2008, 8 (01) :103-106
[43]   Aggregations of juvenile whale sharks (Rhincodon typus) in the Gulf of Tadjoura, Djibouti [J].
Rowat, D. ;
Meekan, M. G. ;
Engelhardt, U. ;
Pardigon, B. ;
Vely, M. .
ENVIRONMENTAL BIOLOGY OF FISHES, 2007, 80 (04) :465-472
[44]   Microsatellite markers for the shortfin mako and cross-species amplification in lamniformes [J].
Schrey, AW ;
Heist, EJ .
CONSERVATION GENETICS, 2002, 3 (04) :459-461
[45]   Movements and growth of a female basking shark re-sighted after a three year period [J].
Sims, DW ;
Speedie, CD ;
Fox, AM .
JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM, 2000, 80 (06) :1141-1142
[46]   Errors in identification using natural markings: rates, sources, and effects on capture-recapture estimates of abundance [J].
Stevick, PT ;
Palsboll, PJ ;
Smith, TD ;
Bravington, MV ;
Hammond, PS .
CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES, 2001, 58 (09) :1861-1870
[47]   GIMLET:: a computer program for analysing genetic individual identification data [J].
Valière, N .
MOLECULAR ECOLOGY NOTES, 2002, 2 (03) :377-379
[48]   MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data [J].
Van Oosterhout, C ;
Hutchinson, WF ;
Wills, DPM ;
Shipley, P .
MOLECULAR ECOLOGY NOTES, 2004, 4 (03) :535-538
[49]   A computer-aided program for pattern-matching of natural marks on the spotted raggedtooth shark Carcharias taurus [J].
Van Tienhoven, A. M. ;
Den Hartog, J. E. ;
Reijns, R. A. ;
Peddemors, V. M. .
JOURNAL OF APPLIED ECOLOGY, 2007, 44 (02) :273-280
[50]   Status and conservation of the grey seal, Halichoerus grypus, in France [J].
Vincent, C ;
Fedak, MA ;
McConnell, JB ;
Meynier, L ;
Saint-Jean, C ;
Ridoux, V .
BIOLOGICAL CONSERVATION, 2005, 126 (01) :62-73