RNA helicases and abiotic stress

被引:128
作者
Owttrim, George W. [1 ]
机构
[1] Univ Alberta, Dept Biol Sci, Edmonton, AB T6G 2E9, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
D O I
10.1093/nar/gkl408
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
RNA helicases function as molecular motors that rearrange RNA secondary structure, potentially performing roles in any cellular process involving RNA metabolism. Although RNA helicase association with a range of cellular functions is well documented, their importance in response to abiotic stress is only beginning to emerge. This review summarizes the available data on the expression, biochemistry and physiological function(s) of RNA helicases regulated by abiotic stress. Examples originate primarily from non-mammalian organisms while instances from mammalian sources are restricted to post-translational regulation of helicase biochemical activity. Common emerging themes include the requirement of a cold-induced helicase in non-homeothermic organisms, association and regulation of helicase activity by stress-induced phosphorylation cascades, altered nuclear-cytoplasmic shuttling in eukaryotes, association with the transcriptional apparatus and the diversity of biochemical activities catalyzed by a subgroup of stress-induced helicases. The data are placed in the context of a mechanism for RNA helicase involvement in cellular response to abiotic stress. It is proposed that stress-regulated helicases can catalyze a nonlinear, reversible sequence of RNA secondary structure rearrangements which function in RNA maturation or RNA proofreading, providing a mechanism by which helicase activity alters the activation state of target RNAs through regulation of the reaction equilibrium.
引用
收藏
页码:3220 / 3230
页数:11
相关论文
共 72 条
  • [1] The DEAD box RNA helicase family in Arabidopsis thaliana
    Aubourg, S
    Kreis, M
    Lecharny, A
    [J]. NUCLEIC ACIDS RESEARCH, 1999, 27 (02) : 628 - 636
  • [2] The DEAD box protein p68: a novel transcriptional coactivator of the p53 tumour suppressor
    Bates, GJ
    Nicol, SM
    Wilson, BJ
    Jacobs, AMF
    Bourdon, JC
    Wardrop, J
    Gregory, DJ
    Lane, DP
    Perkins, ND
    Fuller-Pace, FV
    [J]. EMBO JOURNAL, 2005, 24 (03) : 543 - 553
  • [3] Genomewide transcriptional analysis of the cold shock response in Bacillus subtilis
    Beckering, CL
    Steil, L
    Weber, MHW
    Völker, U
    Marahiel, MA
    [J]. JOURNAL OF BACTERIOLOGY, 2002, 184 (22) : 6395 - 6402
  • [4] Studies on three E-coli DEAD-box helicases point to an unwinding mechanism different from that of model DNA helicases
    Bizebard, T
    Ferlenghi, I
    Iost, I
    Dreyfus, M
    [J]. BIOCHEMISTRY, 2004, 43 (24) : 7857 - 7866
  • [5] Absence of Dbp2p alters both nonsense-mediated mRNA decay and rRNA processing
    Bond, AT
    Mangus, DA
    He, F
    Jacobson, A
    [J]. MOLECULAR AND CELLULAR BIOLOGY, 2001, 21 (21) : 7366 - 7379
  • [6] Transcriptional profiling of the hyperthermophilic methanarchaeon Methanococcus jannaschii in response to lethal heat and non-lethal cold shock
    Boonyaratanakornkit, BB
    Simpson, AJ
    Whitehead, TA
    Fraser, CM
    El-Sayed, NMA
    Clark, DS
    [J]. ENVIRONMENTAL MICROBIOLOGY, 2005, 7 (06) : 789 - 797
  • [7] HIGHLY CONSERVED GENES-CODING FOR EUKARYOTIC TRANSLATION INITIATION-FACTOR EIF-4A OF TOBACCO HAVE SPECIFIC ALTERATIONS IN FUNCTIONAL MOTIFS
    BRANDER, KA
    MANDEL, T
    OWTTRIM, GW
    KUHLEMEIER, C
    [J]. BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION, 1995, 1261 (03): : 442 - 444
  • [8] Identification of the Clostridium perfringens genes involved in the adaptive response to oxidative stress
    Briolat, V
    Reysset, G
    [J]. JOURNAL OF BACTERIOLOGY, 2002, 184 (09) : 2333 - 2343
  • [9] Helicase structure and mechanism
    Caruthers, JM
    McKay, DB
    [J]. CURRENT OPINION IN STRUCTURAL BIOLOGY, 2002, 12 (01) : 123 - 133
  • [10] Regulation of cold shock-induced RNA helicase gene expression in the cyanobacterium Anabaena sp strain PCC 7120
    Chamot, D
    Owttrim, GW
    [J]. JOURNAL OF BACTERIOLOGY, 2000, 182 (05) : 1251 - 1256