The emerging role of RNA and DNA editing in cancer

被引:39
作者
Avesson, Lotta [1 ]
Barry, Guy [1 ]
机构
[1] St Vincents Hosp, Garvan Inst Med Res, Darlinghurst, NSW 2010, Australia
来源
BIOCHIMICA ET BIOPHYSICA ACTA-REVIEWS ON CANCER | 2014年 / 1845卷 / 02期
基金
瑞典研究理事会;
关键词
RNA editing; ADAR; APOBEC; Cancer; B MESSENGER-RNA; TO-INOSINE RNA; AMPA RECEPTORS; SELECTIVE-INHIBITION; MUTATIONAL PROCESSES; HUMAN GLIOBLASTOMA; MOUSE MODEL; APO-B; ADAR1; GENE;
D O I
10.1016/j.bbcan.2014.03.001
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
Nucleotide sequence modification through single base editing in animals is emerging as an important player in tumorigenesis. RNA editing especially has increased greatly during mammalian evolution and modulates diverse cellular functions presumably in a context-dependent manner. Sequence editing impacts development, including pluripotency and hematopoiesis, and multiple recent studies have shown that dysregulation of editing is associated with tumor biology. Much is yet to be learned about the role of sequence editing in human biology but this process is a critical modulator of tell regulation and may present an attractive option for therapeutic intervention in cancer in the future. Significance: Sequence editing provides an additional regulatory layer of cancer initiation and progression that may be amenable to therapeutic design. Although editing of both RNA and DNA substrates has been known to occur for some time, the extent and implications of these modifications have been grossly underappreciated until recent genome-wide and disease-association studies were reported. This review highlights the cellular processes controlled by sequence editing, their implications in normal and cancerous states and considers potential targeted therapeutic strategies. (C) 2014 Elsevier B.V. All rights reserved.
引用
收藏
页码:308 / 316
页数:9
相关论文
共 112 条
[1]
Signatures of mutational processes in human cancer [J].
Alexandrov, Ludmil B. ;
Nik-Zainal, Serena ;
Wedge, David C. ;
Aparicio, Samuel A. J. R. ;
Behjati, Sam ;
Biankin, Andrew V. ;
Bignell, Graham R. ;
Bolli, Niccolo ;
Borg, Ake ;
Borresen-Dale, Anne-Lise ;
Boyault, Sandrine ;
Burkhardt, Birgit ;
Butler, Adam P. ;
Caldas, Carlos ;
Davies, Helen R. ;
Desmedt, Christine ;
Eils, Roland ;
Eyfjord, Jorunn Erla ;
Foekens, John A. ;
Greaves, Mel ;
Hosoda, Fumie ;
Hutter, Barbara ;
Ilicic, Tomislav ;
Imbeaud, Sandrine ;
Imielinsk, Marcin ;
Jaeger, Natalie ;
Jones, David T. W. ;
Jones, David ;
Knappskog, Stian ;
Kool, Marcel ;
Lakhani, Sunil R. ;
Lopez-Otin, Carlos ;
Martin, Sancha ;
Munshi, Nikhil C. ;
Nakamura, Hiromi ;
Northcott, Paul A. ;
Pajic, Marina ;
Papaemmanuil, Elli ;
Paradiso, Angelo ;
Pearson, John V. ;
Puente, Xose S. ;
Raine, Keiran ;
Ramakrishna, Manasa ;
Richardson, Andrea L. ;
Richter, Julia ;
Rosenstiel, Philip ;
Schlesner, Matthias ;
Schumacher, Ton N. ;
Span, Paul N. ;
Teague, Jon W. .
NATURE, 2013, 500 (7463) :415-+
[2]
apoB and apobec1, two genes key to lipid metabolism, are transcriptionally regulated by p53 [J].
Ashur-Fabian, Osnat ;
Har-Zahav, Adi ;
Shaish, Aviv ;
Amram, Hila Wiener ;
Margalit, Ofer ;
Weizer-Stern, Orly ;
Dominissini, Dan ;
Harats, Dror ;
Amariglio, Ninette ;
Rechavi, Gideon .
CELL CYCLE, 2010, 9 (18) :3761-3770
[3]
The role of regulatory RNA in cognitive evolution [J].
Barry, Guy ;
Mattick, John S. .
TRENDS IN COGNITIVE SCIENCES, 2012, 16 (10) :497-503
[4]
A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes [J].
Bazak, Lily ;
Haviv, Ami ;
Barak, Michal ;
Jacob-Hirsch, Jasmine ;
Deng, Patricia ;
Zhang, Rui ;
Isaacs, Farren J. ;
Rechavi, Gideon ;
Li, Jin Billy ;
Eisenberg, Eli ;
Levanon, Erez Y. .
GENOME RESEARCH, 2014, 24 (03) :365-376
[5]
RNA hyperediting and alternative splicing of hematopoietic cell phosphatase (PTPN6) gene in acute myeloid leukemia [J].
Beghini, A ;
Ripamonti, CB ;
Peterlongo, P ;
Roversi, G ;
Cairoli, R ;
Morra, E ;
Larizza, L .
HUMAN MOLECULAR GENETICS, 2000, 9 (15) :2297-2304
[6]
MAJOR TRANSCRIPT OF THE FRAMESHIFTED COXLL GENE FROM TRYPANOSOME MITOCHONDRIA CONTAINS 4 NUCLEOTIDES THAT ARE NOT ENCODED IN THE DNA [J].
BENNE, R ;
VANDENBURG, J ;
BRAKENHOFF, JPJ ;
SLOOF, P ;
VANBOOM, JH ;
TROMP, MC .
CELL, 1986, 46 (06) :819-826
[7]
Reprogramming towards pluripotency requires AID-dependent DNA demethylation [J].
Bhutani, Nidhi ;
Brady, Jennifer J. ;
Damian, Mara ;
Sacco, Alessandra ;
Corbel, Stephane Y. ;
Blau, Helen M. .
NATURE, 2010, 463 (7284) :1042-U57
[8]
Deletion of the AU-Rich RNA binding protein apobec-1 reduces intestinal tumor burden in Apcmin mice [J].
Blanc, Valerie ;
Henderson, Jeffrey O. ;
Newberry, Rodney D. ;
Xie, Yan ;
Cho, Soo-Jin ;
Newberry, Elizabeth P. ;
Kennedy, Susan ;
Rubin, Deborah C. ;
Wang, Hanlin L. ;
Luo, Jianyang ;
Davidson, Nicholas O. .
CANCER RESEARCH, 2007, 67 (18) :8565-8573
[9]
APOBEC-1-mediated RNA editing [J].
Blanc, Valerie ;
Davidson, Nicholas O. .
WILEY INTERDISCIPLINARY REVIEWS-SYSTEMS BIOLOGY AND MEDICINE, 2010, 2 (05) :594-602
[10]
RNA editing of human microRNAs [J].
Blow, Matthew J. ;
Grocock, Russell J. ;
van Dongen, Stijn ;
Enright, Anton J. ;
Dicks, Ed ;
Futreal, P. Andrew ;
Wooster, Richard ;
Stratton, Michael R. .
GENOME BIOLOGY, 2006, 7 (04)