Exome sequencing of Bardet-Biedl syndrome patient identifies a null mutation in the BBSome subunit BBIP1 (BBS18)

被引:101
作者
Scheidecker, Sophie [1 ]
Etard, Christelle [2 ]
Pierce, Nathan W. [3 ]
Geoffroy, Veronique [4 ]
Schaefer, Elise [1 ,5 ]
Muller, Jean [6 ,7 ]
Chennen, Kirsley [1 ,7 ]
Flori, Elisabeth [8 ]
Pelletier, Valerie [5 ]
Poch, Olivier [7 ]
Marion, Vincent [1 ]
Stoetzel, Corinne [1 ]
Straehle, Uwe [2 ]
Nachury, Maxence V. [3 ]
Dollfus, Helene [1 ,5 ]
机构
[1] Univ Strasbourg, INSERM, U1112, Lab Genet Med,FMTS, F-67085 Strasbourg, France
[2] Karlsruher Inst Technol, Inst Toxikol & Genet Campus Nord, Eggenstein Leopoldshafen, Germany
[3] Stanford Univ, Sch Med, Dept Mol & Cellular Physiol, Stanford, CA 94305 USA
[4] Univ Strasbourg, Plate Forme Bioinformat Strasbourg, IGBMC, CNRS,UMR7104,INSERM,U964, Illkirch Graffenstaden, France
[5] Hop Univ Strasbourg, Ctr Reference Affect Rares Genet Ophtalmol CARGO, Gen Med Serv, Strasbourg, France
[6] Hop Univ Strasbourg, Lab Diagnost Genet, Strasbourg, France
[7] Univ Strasbourg, Integrat Genom & Bioinformat Lab, IGBMC, CNRS,UMR7104,INSERM,U964,ICube,UMR 7357, Illkirch Graffenstaden, France
[8] Hop Univ Strasbourg, Cytogenet Serv, Strasbourg, France
关键词
Clinical Genetics; Diagnostics Tests; Genetic Screening; Counselling; Molecular Genetics; Ophthalmology; DIAGNOSIS; PROTEINS; COMPLEX;
D O I
10.1136/jmedgenet-2013-101785
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background Bardet-Biedl syndrome (BBS) is a recessive and genetically heterogeneous ciliopathy characterised by retinitis pigmentosa, obesity, kidney dysfunction, postaxial polydactyly, behavioural dysfunction and hypogonadism. 7 of the 17 BBS gene products identified to date assemble together with the protein BBIP1/BBIP10 into the BBSome, a protein complex that ferries signalling receptors to and from cilia. Methods and results Exome sequencing performed on a sporadic BBS case revealed for the first time a homozygous stop mutation (NM_001195306: c.173T>G, p.Leu58*) in the BBIP1 gene. This mutation is pathogenic since no BBIP1 protein could be detected in fibroblasts from the patient, and BBIP1[Leu58*] is unable to associate with the BBSome subunit BBS4. Conclusions These findings identify BBIP1 as the 18th BBS gene (BBS18) and suggest that BBSome assembly may represent a unifying pathomechanism for BBS.
引用
收藏
页码:132 / 136
页数:5
相关论文
共 19 条
[1]   A method and server for predicting damaging missense mutations [J].
Adzhubei, Ivan A. ;
Schmidt, Steffen ;
Peshkin, Leonid ;
Ramensky, Vasily E. ;
Gerasimova, Anna ;
Bork, Peer ;
Kondrashov, Alexey S. ;
Sunyaev, Shamil R. .
NATURE METHODS, 2010, 7 (04) :248-249
[2]  
Beales PL, 1999, J MED GENET, V36, P437
[3]   Whole-exome sequencing identifies a mutation in the mitochondrial ribosome protein MRPL44 to underlie mitochondrial infantile cardiomyopathy [J].
Carroll, Christopher J. ;
Isohanni, Pirjo ;
Poyhonen, Rosanna ;
Euro, Liliya ;
Richter, Uwe ;
Brilhante, Virginia ;
Gotz, Alexandra ;
Lahtinen, Taina ;
Paetau, Anders ;
Pihko, Helena ;
Battersby, Brendan J. ;
Tyynismaa, Henna ;
Suomalainen, Anu .
JOURNAL OF MEDICAL GENETICS, 2013, 50 (03) :151-159
[4]   Human Splicing Finder: an online bioinformatics tool to predict splicing signals [J].
Desmet, Francois-Olivier ;
Hamroun, Dalil ;
Lalande, Marine ;
Collod-Beroud, Gwenaelle ;
Claustres, Mireille ;
Beroud, Christophe .
NUCLEIC ACIDS RESEARCH, 2009, 37 (09)
[5]   Kupffer's vesicle is a ciliated organ of asymmetry in the zebrafish embryo that initiates left-right development of the brain, heart and gut [J].
Essner, JJ ;
Amack, JD ;
Nyholm, MK ;
Harris, EB ;
Yost, J .
DEVELOPMENT, 2005, 132 (06) :1247-1260
[6]   The Conserved Bardet-Biedl Syndrome Proteins Assemble a Coat that Traffics Membrane Proteins to Cilia [J].
Jin, Hua ;
White, Susan Roehl ;
Shida, Toshinobu ;
Schulz, Stefan ;
Aguiar, Mike ;
Gygi, Steven P. ;
Bazan, J. Fernando ;
Nachury, Maxence V. .
CELL, 2010, 141 (07) :1208-U198
[7]   Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm [J].
Kumar, Prateek ;
Henikoff, Steven ;
Ng, Pauline C. .
NATURE PROTOCOLS, 2009, 4 (07) :1073-1082
[8]   A BBSome Subunit Links Ciliogenesis, Microtubule Stability, and Acetylation [J].
Loktev, Alexander V. ;
Zhang, Qihong ;
Beck, John S. ;
Searby, Charles C. ;
Scheetz, Todd E. ;
Bazan, J. Fernando ;
Slusarski, Diane C. ;
Sheffield, Val C. ;
Jackson, Peter K. ;
Nachury, Maxence V. .
DEVELOPMENTAL CELL, 2008, 15 (06) :854-865
[9]   Exome sequencing identifies mutations in LZTFL1, a BBSome and smoothened trafficking regulator, in a family with Bardet-Biedl syndrome with situs inversus and insertional polydactyly [J].
Marion, Vincent ;
Stutzmann, Fanny ;
Gerard, Marion ;
De Melo, Charlie ;
Schaefer, Elise ;
Claussmann, Aurelie ;
Helle, Sophie ;
Delague, Valerie ;
Souied, Eric ;
Barrey, Catherine ;
Verloes, Alain ;
Stoetzel, Corinne ;
Dollfus, Helene .
JOURNAL OF MEDICAL GENETICS, 2012, 49 (05) :317-321
[10]  
Müller F, 1999, DEVELOPMENT, V126, P2103