Positional Information Generated by Spatially Distributed Signaling Cascades

被引:33
作者
Munoz-Garcia, Javier [1 ,2 ,3 ]
Neufeld, Zoltan [1 ,2 ]
Kholodenko, Boris N. [4 ,5 ]
机构
[1] Univ Coll Dublin, Sch Math Sci, Dublin 2, Ireland
[2] Univ Coll Dublin, Complex Adapt Syst Lab, Dublin 2, Ireland
[3] GISC, Madrid, Spain
[4] Univ Coll Dublin, UCD Conway Inst, Dublin 2, Ireland
[5] Thomas Jefferson Univ, Dept Pathol Anat & Cell Biol, Philadelphia, PA 19107 USA
关键词
REACTION-DIFFUSION MECHANISM; PROTEIN-KINASE CASCADES; MAP KINASE; TRANSDUCTION PATHWAYS; FEEDBACK; MODEL; OSCILLATIONS; BISTABILITY; ACTIVATION; GRADIENTS;
D O I
10.1371/journal.pcbi.1000330
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The temporal and stationary behavior of protein modification cascades has been extensively studied, yet little is known about the spatial aspects of signal propagation. We have previously shown that the spatial separation of opposing enzymes, such as a kinase and a phosphatase, creates signaling activity gradients. Here we show under what conditions signals stall in the space or robustly propagate through spatially distributed signaling cascades. Robust signal propagation results in activity gradients with long plateaus, which abruptly decay at successive spatial locations. We derive an approximate analytical solution that relates the maximal amplitude and propagation length of each activation profile with the cascade level, protein diffusivity, and the ratio of the opposing enzyme activities. The control of the spatial signal propagation appears to be very different from the control of transient temporal responses for spatially homogenous cascades. For spatially distributed cascades where activating and deactivating enzymes operate far from saturation, the ratio of the opposing enzyme activities is shown to be a key parameter controlling signal propagation. The signaling gradients characteristic for robust signal propagation exemplify a pattern formation mechanism that generates precise spatial guidance for multiple cellular processes and conveys information about the cell size to the nucleus.
引用
收藏
页数:11
相关论文
共 46 条
[1]   General considerations for proteolytic cascades [J].
Amour, A ;
Bird, M ;
Chaudry, L ;
Deadman, J ;
Hayes, D ;
Kay, C .
BIOCHEMICAL SOCIETY TRANSACTIONS, 2004, 32 :15-16
[2]   A computational study of feedback effects on signal dynamics in a mitogen-activated protein kinase (MAPK) pathway model [J].
Asthagiri, AR ;
Lauffenburger, DA .
BIOTECHNOLOGY PROGRESS, 2001, 17 (02) :227-239
[3]   MAP kinase phosphatase as a locus of flexibility in a mitogen-activated protein kinase signaling network [J].
Bhalla, US ;
Ram, PT ;
Iyengar, R .
SCIENCE, 2002, 297 (5583) :1018-1023
[4]   Effects of sequestration on signal transduction cascades [J].
Blüthgen, N ;
Bruggeman, FJ ;
Legewie, S ;
Herzel, H ;
Westerhoff, HV ;
Kholodenko, BN .
FEBS JOURNAL, 2006, 273 (05) :895-906
[5]   Differential feedback regulation of the MAPK cascade underlies the quantitative differences in EGF and NGF signalling in PC12 cells [J].
Brightman, FA ;
Fell, DA .
FEBS LETTERS, 2000, 482 (03) :169-174
[6]   Spatial gradients of cellular phospho-proteins [J].
Brown, GC ;
Kholodenko, BN .
FEBS LETTERS, 1999, 457 (03) :452-454
[7]   Mammalian MAP kinase signalling cascades [J].
Chang, LF ;
Karin, M .
NATURE, 2001, 410 (6824) :37-40
[8]   On the Lambert W function [J].
Corless, RM ;
Gonnet, GH ;
Hare, DEG ;
Jeffrey, DJ ;
Knuth, DE .
ADVANCES IN COMPUTATIONAL MATHEMATICS, 1996, 5 (04) :329-359
[9]   How responses get more switch like as you move dawn a protein kinase cascade [J].
Ferrell, JE .
TRENDS IN BIOCHEMICAL SCIENCES, 1997, 22 (08) :288-289
[10]   Midzone activation of aurora B in anaphase produces an intracellular phosphorylation gradient [J].
Fuller, Brian G. ;
Lampson, Michael A. ;
Foley, Emily A. ;
Rosasco-Nitcher, Sara ;
Le, Kim V. ;
Tobelmann, Page ;
Brautigan, David L. ;
Stukenberg, P. Todd ;
Kapoor, Tarun M. .
NATURE, 2008, 453 (7198) :1132-U14