Molecular beacons: Trial of a fluorescence-based solution hybridization technique for ecological studies with ruminal bacteria

被引:23
作者
Schofield, P [1 ]
Pell, AN [1 ]
Krause, DO [1 ]
机构
[1] CORNELL UNIV,DEPT ANIM SCI,ITHACA,NY 14853
关键词
D O I
10.1128/AEM.63.3.1143-1147.1997
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Molecular beacons are fluorescent probes developed for solution rather than membrane hybridization. We have investigated the utility of these probes to study rumen microbial ecology. Two cellulolytic species, Ruminococcus albus and Fibrobacter succinogenes, were tested, Membrane and solution hybridizations gave similar results in competition experiments with cocultures of R. albus 8 and F. succinogenes S85.
引用
收藏
页码:1143 / 1147
页数:5
相关论文
共 15 条
[1]   FLUORESCENT-OLIGONUCLEOTIDE PROBING OF WHOLE CELLS FOR DETERMINATIVE, PHYLOGENETIC, AND ENVIRONMENTAL-STUDIES IN MICROBIOLOGY [J].
AMANN, RI ;
KRUMHOLZ, L ;
STAHL, DA .
JOURNAL OF BACTERIOLOGY, 1990, 172 (02) :762-770
[2]  
BRYANT MP, 1972, AM J CLIN NUTR, V25, P1324
[3]  
HUNGATE RE, 1950, BACTERIOL REV, V14, P1
[4]   An rRNA approach for assessing the role of obligate amino acid-fermenting bacteria in ruminal amino acid deamination [J].
Krause, DO ;
Russell, JB .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1996, 62 (03) :815-821
[5]  
LATHAM MJ, 1978, APPL ENVIRON MICROB, V35, P156, DOI 10.1128/AEM.35.1.156-165.1978
[6]   TAXON-SPECIFIC PROBES FOR THE CELLULOLYTIC GENUS FIBROBACTER REVEAL ABUNDANT AND NOVEL EQUINE-ASSOCIATED POPULATIONS [J].
LIN, CZ ;
STAHL, DA .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1995, 61 (04) :1348-1351
[7]  
MATZURA O, 1995, COMMUNICATION
[8]   THE USE OF 16S RIBOSOMAL-RNA-TARGETED OLIGONUCLEOTIDE PROBES TO STUDY COMPETITION BETWEEN RUMINAL FIBROLYTIC BACTERIA - DEVELOPMENT OF PROBES FOR RUMINOCOCCUS SPECIES AND EVIDENCE FOR BACTERIOCIN PRODUCTION [J].
ODENYO, AA ;
MACKIE, RI ;
STAHL, DA ;
WHITE, BA .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1994, 60 (10) :3688-3696
[9]   Utilization of individual cellodextrins by three predominant ruminal cellulolytic bacteria [J].
Shi, Y ;
Weimer, PJ .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1996, 62 (03) :1084-1088
[10]  
Stahl D. A., 1991, NUCL ACID TECHNIQUES, P205