Solvent effects on 13C and 15N shielding tensors of nitroimidazoles in the condensed phase:: a sequential molecular dynamics/quantum mechanics study

被引:48
作者
Ramalho, TC
da Cunha, EFF
de Alencastro, RB
机构
[1] Max Planck Inst Kohlenforsch, D-45470 Mulheim, Germany
[2] Univ Fed Rio de Janeiro, Inst Quim, Dept Quim Organ, Phys Organ Chem Grp, BR-21949900 Rio De Janeiro, Brazil
关键词
D O I
10.1088/0953-8984/16/34/015
中图分类号
O469 [凝聚态物理学];
学科分类号
070205 ;
摘要
N-15-and C-13 NMR chemical shifts for three nitroimidazoles have been calculated and compared with experimental data. The solvent effects on NMR spectra were simulated with the polarizable continuum model (PCM) and an alternative sequential molecular dynamics/quantum mechanics methodology (S-MD/QM). The sampling of the structures for the quantum mechanical calculations is made by using the interval of statistical correlation obtained from the autocorrelation function of the energy. Magnetic shielding tensors were evaluated at the GIAO-B3LYP level using II' basis set. It has been shown that it is essential to incorporate the dynamics and solvent effects in NMR calculations in the condensed phase.
引用
收藏
页码:6159 / 6170
页数:12
相关论文
共 58 条
[41]   NMR chemical shifts of ice and liquid water: The effects of condensation [J].
Pfrommer, BG ;
Mauri, F ;
Louie, SG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2000, 122 (01) :123-129
[42]   Conformational analysis of some 1R,4S-2-arylidene-p-menthan-3-ones by 1H NMR spectroscopy and molecular simulation [J].
Pivnenko, NS ;
Drushlyak, TG ;
Kutulya, LA ;
Vashchenko, VV ;
Doroshenko, AO ;
Goodby, JW .
MAGNETIC RESONANCE IN CHEMISTRY, 2002, 40 (09) :566-572
[43]   Theoretical evaluation of adiabatic and vertical electron affinity of some radiosensitizers in solution using FEP, ab initio and DFT methods [J].
Ramalho, TC ;
de Alencastro, RB ;
La-Scalea, MA ;
Figueroa-Villar, JD .
BIOPHYSICAL CHEMISTRY, 2004, 110 (03) :267-279
[44]   A density functional study on the complexation of ethambutol with divalent cations [J].
Ramalho, TC ;
da Cunha, EFF ;
de Alencastro, RB .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2004, 676 (1-3) :149-153
[45]   Influence of nonbonded interactions in the kinetics of formation of chalcogenol esters from chalcogenoacetylenes [J].
Ramalho, TC ;
Martins, TLC ;
Borges, LEP ;
Figueroa-Villar, JD .
INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, 2003, 95 (03) :267-273
[46]   Thermodynamic evaluation of complexes of zinc and cadmium that mimetize metallic centers in transcription factors [J].
Ramalho, TC ;
Figueroa-Villar, JD .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2002, 580 :217-223
[47]  
REICHARDT C, 1979, SOLVENTS SOLVENT EFF
[48]   Solvent effects on the indirect spin-spin coupling constants of benzene: The DFT-PCM approach [J].
Ruud, K ;
Frediani, L ;
Cammi, R ;
Mennucci, B .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2003, 4 (03) :119-134
[49]   A new ab-initio approach for NMR chemical shifts in periodic systems [J].
Sebastiani, D ;
Parrinello, M .
JOURNAL OF PHYSICAL CHEMISTRY A, 2001, 105 (10) :1951-1958
[50]   Applications of ab initio atomistic simulations to biology [J].
Segall, MD .
JOURNAL OF PHYSICS-CONDENSED MATTER, 2002, 14 (11) :2957-2973