Comparative genomic analysis of plant-associated bacteria

被引:120
作者
Van Sluys, MA [1 ]
Monteiro-Vitorello, CB
Camargo, LEA
Menck, CFM
da Silva, ACR
Ferro, JA
Oliveira, MC
Setubal, JC
Kitajima, JP
Simpson, AJ
机构
[1] Univ Sao Paulo, Inst Biociencias, Dept Bot, BR-05508 Sao Paulo, Brazil
[2] Univ Sao Paulo, Escola Super Agr Luiz Queiroz, BR-05508 Sao Paulo, Brazil
[3] Univ Sao Paulo, Inst Ciencias Biomed, Dept Microbiol, BR-05508 Sao Paulo, Brazil
[4] Univ Sao Paulo, Inst Quim, Dept Bioquim, BR-01498 Sao Paulo, Brazil
[5] Univ Estadual Paulista, Fac Ciencias Agrarias & Vet, Dept Tecnol, Sao Paulo, Brazil
[6] Univ Estadual Campinas, Inst Comp, BR-13081970 Campinas, SP, Brazil
[7] Univ Estadual Campinas, Ctr Biol Mol & Engn Genet, BR-13081970 Campinas, SP, Brazil
[8] Inst Ludwig Pesquisa Sobre Canc, Sao Paulo, Brazil
关键词
bacteria; pathogen; symbiont; genome sequence; genome structure;
D O I
10.1146/annurev.phyto.40.030402.090559
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
This review deals with a comparative analysis of seven genome sequences from plant-associated bacteria. These are the genomes of Agrobacterium tumefaciens, Mesorhizobium loti, Sinorhizobium meliloti, Xanthomonas campestris pv campestris, Xanthomonas axonopodis pv citri, Xylella fastidiosa, and Ralstonia solanacearum. Genome structure and the metabolism pathways available highlight the compromise between the genome size and lifestyle. Despite the recognized importance of the type III secretion system in controlling host compatibility, its presence is not universal in all necrogenic pathogens. Hemolysins, hemagglutinins, and some adhesins, previously reported only for mammalian pathogens, are present in most organisms discussed. Different numbers and combinations of cell wall degrading enzymes and genes to overcome the oxidative burst generally induced by the plant host are characterized in these genomes. A total of 19 genes not involved in housekeeping functions were found common to all these bacteria.
引用
收藏
页码:169 / 189
页数:21
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