Chromatin studies by DNA-protein cross-linking

被引:10
作者
Pruss, D
Bavykin, SG
机构
[1] NICHHD, MOL EMBRYOL LAB, NIH, BETHESDA, MD 20892 USA
[2] RUSSIAN ACAD SCI, VA ENGELHARDT MOL BIOL INST, MOSCOW 117984, RUSSIA
关键词
D O I
10.1006/meth.1997.0445
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Our current level of understanding of chromatin structure was to a large extent achieved with the help of DNA-protein cross-linking. The versatile inventory of cross-linking techniques allows the identification of the contacts between DNA and proteins with a single nucleotide-single amino acid precision, to detect minor components of the complex nucleoprotein systems, to reveal the interactions of the flexible protein domains with DNA, and to assay for conformational changes in the nucleosomes. (C) 1997 Academic Press.
引用
收藏
页码:36 / 47
页数:12
相关论文
共 66 条
[1]   ROLES OF H-1 DOMAINS IN DETERMINING HIGHER-ORDER CHROMATIN STRUCTURE AND H-1 LOCATION [J].
ALLAN, J ;
MITCHELL, T ;
HARBORNE, N ;
BOHM, L ;
CRANEROBINSON, C .
JOURNAL OF MOLECULAR BIOLOGY, 1986, 187 (04) :591-601
[2]   THE STRUCTURE OF HISTONE-H1 AND ITS LOCATION IN CHROMATIN [J].
ALLAN, J ;
HARTMAN, PG ;
CRANEROBINSON, C ;
AVILES, FX .
NATURE, 1980, 288 (5792) :675-679
[3]   TOPOGRAPHY OF THE HISTONE OCTAMER SURFACE - REPEATING STRUCTURAL MOTIFS UTILIZED IN THE DOCKING OF NUCLEOSOMAL DNA [J].
ARENTS, G ;
MOUDRIANAKIS, EN .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (22) :10489-10493
[4]   THE NUCLEOSOMAL CORE HISTONE OCTAMER AT 3.1-A RESOLUTION - A TRIPARTITE PROTEIN ASSEMBLY AND A LEFT-HANDED SUPERHELIX [J].
ARENTS, G ;
BURLINGAME, RW ;
WANG, BC ;
LOVE, WE ;
MOUDRIANAKIS, EN .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (22) :10148-10152
[5]   IMPORTANCE OF THIOLS IN THE REPAIR MECHANISMS OF DNA CONTAINING AP (APURINIC OR APYRIMIDINIC) SITES [J].
BAILLY, V ;
VERLY, WG .
NUCLEIC ACIDS RESEARCH, 1988, 16 (20) :9489-9496
[6]   HISTONE H1 DEPOSITION AND HISTONE DNA INTERACTIONS IN REPLICATING CHROMATIN [J].
BAVYKIN, S ;
SREBREVA, L ;
BANCHEV, T ;
TSANEV, R ;
ZLATANOVA, J ;
MIRZABEKOV, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (09) :3918-3922
[7]   PRIMARY ORGANIZATION OF NUCLEOSOMAL CORE PARTICLES IS INVARIABLE IN REPRESSED AND ACTIVE NUCLEI FROM ANIMAL, PLANT AND YEAST-CELLS [J].
BAVYKIN, SG ;
USACHENKO, SI ;
LISHANSKAYA, AI ;
SHICK, VV ;
BELYAVSKY, AV ;
UNDRITSOV, IM ;
STROKOV, AA ;
ZALENSKAYA, IA ;
MIRZABEKOV, AD .
NUCLEIC ACIDS RESEARCH, 1985, 13 (10) :3439-3459
[8]   STRUCTURE OF NUCLEOSOMES AND ORGANIZATION OF INTERNUCLEOSOMAL DNA IN CHROMATIN [J].
BAVYKIN, SG ;
USACHENKO, SI ;
ZALENSKY, AO ;
MIRZABEKOV, AD .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 212 (03) :495-511
[9]  
BAVYKIN SG, 1984, MOL BIOL, V22, P531
[10]   MAPPING AND POSITIONING DNA-BINDING PROTEINS ALONG GENOMIC DNA - STRUCTURE OF DROSOPHILA-MELANOGASTER RIBOSOMAL ALU-REPEATS AND 1.688 SATELLITE CHROMATIN [J].
BELIKOV, SV ;
BELGOVSKY, AI ;
PARTOLINA, MP ;
KARPOV, VL ;
MIRZABEKOV, AD .
NUCLEIC ACIDS RESEARCH, 1993, 21 (20) :4796-4802