Identification and structural analysis of type I collagen sites in complex with fibronectin fragments

被引:74
作者
Erat, Michele C. [1 ]
Slatter, David A. [3 ]
Lowe, Edward D. [2 ]
Millard, Christopher J. [1 ]
Farndale, Richard W. [3 ]
Campbell, Iain D. [1 ]
Vakonakis, Ioannis [1 ]
机构
[1] Univ Oxford, Dept Biochem, Oxford OX1 3QU, England
[2] Univ Oxford, Lab Mol Biophys, Oxford OX1 3QU, England
[3] Univ Cambridge, Dept Biochem, Cambridge CB2 1QW, England
基金
英国医学研究理事会; 英国惠康基金;
关键词
collagen destabilization; extracellular matrix; protein structure; TRIPLE-HELICAL COLLAGEN; PEPTIDE-BOND HYDROLYSIS; GELATIN-BINDING DOMAIN; EXTRACELLULAR-MATRIX; CELL ATTACHMENT; 6; MODULES; PROTEIN; LOCALIZATION; MECHANISM; AFFINITY;
D O I
10.1073/pnas.0812516106
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
070301 [无机化学]; 070403 [天体物理学]; 070507 [自然资源与国土空间规划学]; 090105 [作物生产系统与生态工程];
摘要
Collagen and fibronectin are major components of vertebrate extracellular matrices. Their association and distribution control the development and properties of diverse tissues, but thus far no structural information has been available for the complex formed. Here, we report binding of a peptide, derived from the alpha(1) chain of type I collagen, to the gelatin-binding domain of human fibronectin and present the crystal structure of this peptide in complex with the (8-9)FnI domain pair. Both gelatin-binding domain subfragments, (6)FnI(1-2)FnII(7)FnI and (8-9)FnI, bind the same specific sequence on D-period 4 of collagen I alpha(1), adjacent to the MMP-1 cleavage site. (8-9)FnI also binds the equivalent sequence of the alpha(2) chain. The collagen peptide adopts an antiparallel beta-strand conformation, similar to structures of proteins from pathogenic bacteria bound to FnI domains. Analysis of the type I collagen sequence suggests multiple putative fibronectin-binding sites compatible with our structural model. We demonstrate, by kinetic unfolding experiments, that the triple-helical collagen state is destabilized by 8-9FnI. This finding suggests a role for fibronectin in collagen proteolysis and tissue remodeling.
引用
收藏
页码:4195 / 4200
页数:6
相关论文
共 48 条
[1]
PHENIX:: building new software for automated crystallographic structure determination [J].
Adams, PD ;
Grosse-Kunstleve, RW ;
Hung, LW ;
Ioerger, TR ;
McCoy, AJ ;
Moriarty, NW ;
Read, RJ ;
Sacchettini, JC ;
Sauter, NK ;
Terwilliger, TC .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2002, 58 :1948-1954
[2]
BALIAN G, 1980, J BIOL CHEM, V255, P3234
[3]
STRUCTURE OF THE FIBRONECTIN TYPE 1 MODULE [J].
BARON, M ;
NORMAN, D ;
WILLIS, A ;
CAMPBELL, ID .
NATURE, 1990, 345 (6276) :642-646
[4]
Crystal structures of fibronectin-binding sites from Staphylococcus aureus FnBPA in complex with fibronectin domains [J].
Bingham, Richard J. ;
Rudino-Pinera, Enrique ;
Meenan, Nicola A. G. ;
Schwarz-Linek, Ulrich ;
Turkenburg, Johan P. ;
Hook, Magnus ;
Garman, Elspeth F. ;
Potts, Jennifer R. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (34) :12254-12258
[5]
Collagenase unwinds triple-helical collagen prior to peptide bond hydrolysis [J].
Linda Chung ;
Deendayal Dinakarpandian ;
Naoto Yoshida ;
Janelle L Lauer‐Fields ;
Gregg B Fields ;
Robert Visse ;
Hideaki Nagase .
The EMBO Journal, 2004, 23 (15) :3020-3030
[6]
IDENTIFICATION OF SITES IN COLLAGEN ALPHA-CHAINS THAT BIND SERUM ANTI-GELATIN FACTOR (COLD-INSOLUBLE GLOBULIN) [J].
DESSAU, W ;
ADELMANN, BC ;
TIMPL, R ;
MARTIN, GR .
BIOCHEMICAL JOURNAL, 1978, 169 (01) :55-59
[7]
Mapping the ligand-binding sites and disease-associated mutations on the most abundant protein in the human, type I collagen [J].
Di Lullo, GA ;
Sweeney, SM ;
Körkkö, J ;
Ala-Kokko, L ;
San Antonio, JD .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (06) :4223-4231
[8]
Streptococcus pyogenes recruits collagen via surface-bound fibronectin:: a novel colonization and immune evasion mechanism [J].
Dinkla, K ;
Rohde, M ;
Jansen, WMT ;
Carapetis, JR ;
Chhatwal, GS ;
Talay, SR .
MOLECULAR MICROBIOLOGY, 2003, 47 (03) :861-869
[9]
Structural basis of collagen recognition by integrin α2β1 [J].
Emsley, J ;
Knight, CG ;
Farndale, RW ;
Barnes, MJ ;
Liddington, RC .
CELL, 2000, 101 (01) :47-56
[10]
Coot:: model-building tools for molecular graphics [J].
Emsley, P ;
Cowtan, K .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 :2126-2132