Hydrodynamics of a DNA molecule in a flow field

被引:168
作者
Larson, RG [1 ]
Perkins, TT [1 ]
Smith, DE [1 ]
Chu, S [1 ]
机构
[1] STANFORD UNIV,DEPT PHYS,STANFORD,CA 94305
来源
PHYSICAL REVIEW E | 1997年 / 55卷 / 02期
关键词
D O I
10.1103/PhysRevE.55.1794
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
The hydrodynamics of a single, fluorescing, DNA molecule held at one end by ''optical tweezers'' and subjected to a uniform flow are compared with Monte Carlo simulations that account for the molecule's entropic elasticity, Brownian motion, and hydrodynamic drag. Using self-diffusion data and analytic expressions to obtain the drag in the limits of the undeformed coil and of the fully stretched thread, the predicted chain stretching and mass distribution are in quantitative agreement with measurements. The results explain the success of the nonlinear elastic ''dumbbell'' model in predicting the rheological properties of dilute polymer solutions.
引用
收藏
页码:1794 / 1797
页数:4
相关论文
共 29 条
[1]   CONFORMATIONAL-CHANGES OF MACROMOLECULES IN TRANSIENT ELONGATIONAL FLOW [J].
ARMSTRONG, RC ;
GUPTA, SK ;
BASARAN, O .
POLYMER ENGINEERING AND SCIENCE, 1980, 20 (07) :466-472
[2]  
Bird R.B., 1987, DYNAMICS POLYM LIQUI, V2
[3]   ENTROPIC ELASTICITY OF LAMBDA-PHAGE DNA [J].
BUSTAMANTE, C ;
MARKO, JF ;
SIGGIA, ED ;
SMITH, S .
SCIENCE, 1994, 265 (5178) :1599-1600
[4]  
CERF R, 1959, ADV POLYM SCI, V1, P382
[5]   DNA: An extensible molecule [J].
Cluzel, P ;
Lebrun, A ;
Heller, C ;
Lavery, R ;
Viovy, JL ;
Chatenay, D ;
Caron, F .
SCIENCE, 1996, 271 (5250) :792-794
[6]   CONFORMATION OF POLYISOBUTYLENE IN DILUTE SOLUTION SUBJECTED TO A HYDRODYNAMIC SHEAR FIELD [J].
COTTRELL, FR ;
MERRILL, EW ;
SMITH, KA .
JOURNAL OF POLYMER SCIENCE PART A-2-POLYMER PHYSICS, 1969, 7 (8PA2) :1415-&
[7]  
Doi M., 1986, The theory of polymer dynamics
[8]   DILUTE POLYSTYRENE SOLUTIONS IN EXTENSIONAL FLOWS - BIREFRINGENCE AND FLOW MODIFICATION [J].
DUNLAP, PN ;
LEAL, LG .
JOURNAL OF NON-NEWTONIAN FLUID MECHANICS, 1987, 23 :5-48
[9]   ROTATIONAL AND TRANSLATIONAL DIFFUSION OF SHORT RODLIKE MOLECULES IN SOLUTION - OLIGONUCLEOTIDES [J].
EIMER, W ;
PECORA, R .
JOURNAL OF CHEMICAL PHYSICS, 1991, 94 (03) :2324-2329
[10]   POLYMER DYNAMICS - BOSON REPRESENTATION AND EXCLUDED-VOLUME FORCES [J].
FIXMAN, M .
JOURNAL OF CHEMICAL PHYSICS, 1966, 45 (03) :785-&