Identification of Pseudomonas aeruginosa using functional magnetic nanoparticle-based affinity capture combined with MALDI MS analysis

被引:27
作者
Liu, Jr-Chi [1 ]
Chen, Wei-Jen [1 ]
Li, Chen-Wei [1 ]
Mong, Kwok-Kong Tony [1 ]
Tsai, Pei-Jane [2 ]
Tsai, Te-Lung [3 ]
Lee, Yuan C. [4 ]
Chen, Yu-Chie [1 ]
机构
[1] Natl Chiao Tung Univ, Dept Appl Chem, Hsinchu 300, Taiwan
[2] Natl Appl Res Labs, Natl Lab Anim Ctr, Taipei 115, Taiwan
[3] Hsinchu Mackay Mem Hosp, Dept Pathol & Lab Med, Hsinchu 300, Taiwan
[4] Johns Hopkins Univ, Dept Biol, Baltimore, MD 21218 USA
关键词
POLYMERASE-CHAIN-REACTION; UROPATHOGENIC ESCHERICHIA-COLI; TITANIUM-DIOXIDE MICROCOLUMNS; MASS-SPECTROMETRIC ANALYSIS; MELTING CURVE ANALYSIS; PATHOGENIC BACTERIA; PHOSPHORYLATED PEPTIDES; SELECTIVE ENRICHMENT; RAPID IDENTIFICATION; CONCENTRATING PROBES;
D O I
10.1039/b908069d
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
PA-IL is a galactophilic lectin that is found on the outer membrane of Pseudomonas aeruginosa. Pigeon ovalbumin (POA), a phosphoprotein, contains high levels of terminal Gala(1 -> 4) Gal units. Thus, magnetic nanoparticles with immobilized POA can be used as affinity probes for P. aeruginosa, functioning via the recognition of galactophilic PA-IL. We fabricated POA-bound nanoparticles (NPs) by immobilizing POA onto the surface of core/shell magnetic iron oxide/alumina NPs via metal phosphate chelation. We then used the generated NPs to probe target bacteria from complex samples. The trapped bacterial cells were characterized based on their mass peak profiles obtained from MALDI MS analyses. In addition, we confirmed the determination of P. aeruginosa using a proteomic strategy: combining the resultant MALDI MS/MS spectra of its tryptic digest with protein database searching. The feasibility of using this approach to rapidly characterize P. aeruginosa from clinical samples without the need to perform culturing steps was also demonstrated.
引用
收藏
页码:2087 / 2094
页数:8
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