Fragment-Based Discovery of BACE1 Inhibitors Using Functional Assays

被引:45
作者
Godemann, Robert [1 ]
Madden, James [2 ]
Kraemer, Joachim [1 ]
Smith, Myron [2 ]
Fritz, Ulrike [1 ]
Hesterkamp, Thomas [1 ]
Barker, John [2 ]
Hoeppner, Sabine [3 ]
Hallett, David [2 ]
Cesura, Andrea [1 ]
Ebneth, Andreas [1 ]
Kemp, John [1 ]
机构
[1] Evotec AG, D-22525 Hamburg, Germany
[2] Evotec Ltd, Abingdon OX14 4SA, Oxon, England
[3] Proteros Biostruct GmbH, D-82152 Planegg Martinsried, Germany
关键词
STRUCTURE-BASED DESIGN; X-RAY CRYSTALLOGRAPHY; BETA-SECRETASE; MODEL; BINDING; ENZYME;
D O I
10.1021/bi901061a
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Novel nonpeptidic inhibitors of beta-secretase (BACE1) have been discovered by employing a fragment-based biochemical screening approach. A diverse library of 20000 low-molecular weight compounds were screened and yielded 26 novel lilts that were confirmed by biochemical and surface plasmon resonance secondary assays. We describe here fragment inhibitors cocrystallized with BACE1 in a flap open and flap closed conformation as determined by X-ray crystallography.
引用
收藏
页码:10743 / 10751
页数:9
相关论文
共 35 条
[1]  
[Anonymous], 2006, PYMOL
[2]   Deconstructing fragment-based inhibitor discovery [J].
Babaoglu, Kerim ;
Shoichet, Brian K. .
NATURE CHEMICAL BIOLOGY, 2006, 2 (12) :720-723
[3]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[4]   Macrocyclic statine-based inhibitors of BACE-1 [J].
Barazza, Alessandra ;
Goetz, Marion ;
Cadamuro, Sergio A. ;
Goettig, Peter ;
Willem, Michael ;
Steuber, Holger ;
Kohler, Tanja ;
Jestel, Anja ;
Reinemer, Peter ;
Renner, Christian ;
Bode, Wolfram ;
Moroder, Luis .
CHEMBIOCHEM, 2007, 8 (17) :2078-2091
[5]   Fragment screening by biochemical assay [J].
Barker, John ;
Courtney, Steve ;
Hesterkamp, Thomas ;
Ullmann, Dirk ;
Whittaker, Mark .
EXPERT OPINION ON DRUG DISCOVERY, 2006, 1 (03) :225-236
[6]   2-amino-3,4-dihydroquinazolines as inhibitors of BACE-1 (β-site APP cleaving enzyme):: Use of structure based design to convert a micromolar hit into a nanomolar lead [J].
Baxter, Ellen W. ;
Conway, Kelly A. ;
Kennis, Ludo ;
Bischoff, Francois ;
Mercken, Marc H. ;
De Winter, Hans L. ;
Reynolds, Charles H. ;
Tounge, Brett A. ;
Luo, Chi ;
Scott, Malcolm K. ;
Huang, Yifang ;
Braeken, Mirielle ;
Pieters, Sere M. A. ;
Berthelot, Didier J. C. ;
Masure, Stefan ;
Bruinzeel, Wouter D. ;
Jordan, Alfonzo D. ;
Parker, Michael H. ;
Boyd, Robert E. ;
Qu, Junya ;
Alexander, Richard S. ;
Brenneman, Douglas E. ;
Reitz, Allen B. .
JOURNAL OF MEDICINAL CHEMISTRY, 2007, 50 (18) :4261-4264
[7]   NanoStore: A concept for logistical improvements of compound handling in high-throughput screening [J].
Benson, N ;
Boyd, HF ;
Everett, JR ;
Fries, J ;
Gribbon, P ;
Haque, N ;
Henco, K ;
Jessen, T ;
Martin, WH ;
Mathewson, TJ ;
Sharp, RE ;
Spencer, RW ;
Stuhmeier, F ;
Wallace, MS ;
Winkler, D .
JOURNAL OF BIOMOLECULAR SCREENING, 2005, 10 (06) :573-580
[8]   Molecular modeling, synthesis, and activity studies of novel biaryl and fused-ring BACE1 inhibitors [J].
Chirapu, Srinivas Reddy ;
Pachaiyappan, Boobalan ;
Nural, Hikmet F. ;
Cheng, Xin ;
Yuan, Hongbin ;
Lankin, David C. ;
Abdul-Hay, Samer O. ;
Thatcher, Gregory R. J. ;
Shen, Yong ;
Kozikowski, Alan P. ;
Petukhov, Pavel A. .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2009, 19 (01) :264-274
[9]   Recent developments in fragment-based drug discovery [J].
Congreve, Miles ;
Chessari, Gianni ;
Tisi, Dominic ;
Woodhead, Andrew J. .
JOURNAL OF MEDICINAL CHEMISTRY, 2008, 51 (13) :3661-3680
[10]   Application of fragment screening by X-ray crystallography to the discovery of aminopyridines as inhibitors of β-secretase [J].
Congreve, Miles ;
Aharony, David ;
Albert, Jeffrey ;
Callaghan, Owen ;
Campbell, James ;
Carr, Robin A. E. ;
Chessari, Gianni ;
Cowan, Suzanna ;
Edwards, Philip D. ;
Frederickson, Martyn ;
McMenamin, Rachel ;
Murray, Christopher W. ;
Patel, Sahil ;
Wallis, Nicola .
JOURNAL OF MEDICINAL CHEMISTRY, 2007, 50 (06) :1124-1132