Kinetic studies of protein L aggregation and disaggregation

被引:29
作者
Cellmer, Troy
Douma, Rutger
Huebner, Ansgar
Prausnitz, John
Blanch, Harvev [1 ]
机构
[1] Univ Calif Berkeley, Dept Chem Engn, Berkeley, CA 94720 USA
[2] Univ Calif Berkeley, Lawrence Berkeley Lab, Div Chem Sci, Berkeley, CA 94720 USA
关键词
protein aggregation; aggregation kinetics; amyloid; fibrils;
D O I
10.1016/j.bpc.2006.09.010
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We have investigated the aggregation of protein L in 25% (vol/vol) TFE and 10 mM HCl. Under both conditions, aggregates adopt a fibrillar structure and bind dyes Congo Red and Thioflavin T consistent with the presence of amyloid fibrils. The kinetics of aggregation in 25% TFE suggest a linear-elongation mechanism with critical nucleus size of either two or three monomers. Aggregation kinetics in 10 mM HCl show a prolonged lag phase prior to a rapid increase in aggregation. The lag phase is time-dependent, but the time dependence can be eliminated by the addition of pre-formed seeds. Disaggregation studies show that for aggregates formed in TFE, aggregate stability is a strong function of aggregate age. For example, after 200 min of aggregation, 40% of the aggregation reaction is irreversible, while after 3 days over 60% is irreversible. When the final concentration of the denaturant, TFE, is reduced from 5% to 0, the amount of reversible aggregation doubles. Disaggregation studies of aggregates formed in TFE and 10 mM HCl reveal a complicated effect of pH on aggregate stability. (c) 2006 Elsevier B.V. All rights reserved.
引用
收藏
页码:350 / 359
页数:10
相关论文
共 25 条
[1]   KINETICS OF NUCLEATION-CONTROLLED POLYMERIZATION - A PERTURBATION TREATMENT FOR USE WITH A SECONDARY PATHWAY [J].
BISHOP, MF ;
FERRONE, FA .
BIOPHYSICAL JOURNAL, 1984, 46 (05) :631-644
[2]   Prefibrillar amyloid protein aggregates share common features of cytotoxicity [J].
Bucciantini, M ;
Calloni, G ;
Chiti, F ;
Formigli, L ;
Nosi, D ;
Dobson, CM ;
Stefani, M .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (30) :31374-31382
[3]   Inherent toxicity of aggregates implies a common mechanism for protein misfolding diseases [J].
Bucciantini, M ;
Giannoni, E ;
Chiti, F ;
Baroni, F ;
Formigli, L ;
Zurdo, JS ;
Taddei, N ;
Ramponi, G ;
Dobson, CM ;
Stefani, M .
NATURE, 2002, 416 (6880) :507-511
[4]   Reversal of protein aggregation provides evidence for multiple aggregated states [J].
Calamai, M ;
Canale, C ;
Relini, A ;
Stefani, M ;
Chiti, F ;
Dobson, CM .
JOURNAL OF MOLECULAR BIOLOGY, 2005, 346 (02) :603-616
[5]   Huntington's disease age-of-onset linked to polyglutamine aggregation nucleation [J].
Chen, SM ;
Ferrone, FA ;
Wetzel, R .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (18) :11884-11889
[6]   Designing conditions for in vitro formation of amyloid protofilaments and fibrils [J].
Chiti, F ;
Webster, P ;
Taddei, N ;
Clark, A ;
Stefani, M ;
Ramponi, G ;
Dobson, CM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (07) :3590-3594
[7]   Protein aggregation determinants from a simplified model: Cooperative folders resist aggregation [J].
Clark, LA .
PROTEIN SCIENCE, 2005, 14 (03) :653-662
[8]   The structural basis of protein folding and its links with human disease [J].
Dobson, CM .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2001, 356 (1406) :133-145
[9]   Prediction of the absolute aggregation rates of amyloidogenic polypeptide chains [J].
Dubay, KF ;
Pawar, AP ;
Chiti, F ;
Zurdo, J ;
Dobson, CM ;
Vendruscolo, M .
JOURNAL OF MOLECULAR BIOLOGY, 2004, 341 (05) :1317-1326
[10]  
Fawzi NL, 2005, PROTEIN SCI, V14, P1380