Quantitation of HHV-7 genome by real-time polymerase chain reaction assay using MGB probe technology

被引:31
作者
Fernandez, C
Boutolleau, D
Manichanh, C
Mangeney, N
Agut, H
Gautheret-Dejean, A
机构
[1] Grp Hosp Pitie Salpetriere, UPRESA EA 2387, Virol Lab, F-75013 Paris, France
[2] Fac Sci Pharmaceut & Biol Paris, Microbiol Lab, F-75006 Paris, France
关键词
human herpesvirus-7; real-time PCR; viral load;
D O I
10.1016/S0166-0934(02)00131-3
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
A real-time PCR assay was developed to quantify human herpesvirus-7 (HHV-7) genome based on TaqMa(R) technology using the new MGB probe. Primers and probe were chosen in the conserved U 100 gene. Plasmid containing the sequence of interest was constructed for the standardisation of the method and to assess its sensitivity. This HHV-7 genomic quantitation assay has a threshold sensitivity of fourteen equivalent genome copy number (EqCop) per reaction. This method was applied to the quantitation of HHV-7 in the peripheral blood mononuclear cells (PBMCs) obtained from 31 healthy subjects. Eighty seven per cent had HHV-7 positive detection in the PBMCs with a viral load ranging from 275 to 14 545 EqCop per million of cells. This method presents interesting characteristics with a wide range of quantitation, a good sensitivity, and constitutes a new tool for the study of HHV-7 infection in vivo and in vitro. (C) 2002 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:11 / 16
页数:6
相关论文
共 11 条
[1]   HUMAN HERPESVIRUS-7 (HHV-7) STRAIN JI - INDEPENDENT CONFIRMATION OF HHV-7 [J].
BERNEMAN, ZN ;
GALLO, RC ;
ABLASHI, DV ;
FRENKEL, N ;
KATSAFANAS, G ;
KRAMARSKY, B ;
BRUS, I .
JOURNAL OF INFECTIOUS DISEASES, 1992, 166 (03) :690-691
[2]   Development of a real-time polymerase chain reaction assay for the diagnosis of human herpesvirus-6 infection and application to bone marrow transplant patients [J].
Gautheret-Dejean, A ;
Manichanh, C ;
Thien-Ah-Koon, F ;
Fillet, AM ;
Mangeney, N ;
Vidaud, M ;
Dhedin, N ;
Vernant, JP ;
Agut, H .
JOURNAL OF VIROLOGICAL METHODS, 2002, 100 (1-2) :27-35
[3]   Development of a fluorogenic polymerase chain reaction assay (TaqMan) for the detection and quantitation of varicella zoster virus [J].
Hawrami, K ;
Breuer, J .
JOURNAL OF VIROLOGICAL METHODS, 1999, 79 (01) :33-40
[4]  
Kidd IM, 1996, J INFECT DIS, V174, P396, DOI 10.1093/infdis/174.2.396
[5]   3′-minor groove binder-DNA probes increase sequence specificity at PCR extension temperatures [J].
Kutyavin, IV ;
Afonina, IA ;
Mills, A ;
Gorn, VV ;
Lukhtanov, EA ;
Belousov, ES ;
Singer, MJ ;
Walburger, DK ;
Lokhov, SG ;
Gall, AA ;
Dempcy, R ;
Reed, MW ;
Meyer, RB ;
Hedgpeth, J .
NUCLEIC ACIDS RESEARCH, 2000, 28 (02) :655-661
[6]  
Laurendeau I, 1999, CLIN CHEM, V45, P982
[7]   Real-time quantitative PCR for human herpesvirus 6 DNA [J].
Locatelli, G ;
Santoro, F ;
Veglia, F ;
Gobbi, A ;
Lusso, P ;
Malnati, MS .
JOURNAL OF CLINICAL MICROBIOLOGY, 2000, 38 (11) :4042-4048
[8]   Selective reactivation of human herpesvirus 6 variant a occurs in critically ill immunocompetent hosts [J].
Razonable, RR ;
Fanning, C ;
Brown, RA ;
Espy, MJ ;
Rivero, A ;
Wilson, J ;
Kremers, W ;
Smith, TF ;
Paya, CV .
JOURNAL OF INFECTIOUS DISEASES, 2002, 185 (01) :110-113
[9]   Development of a high-throughput quantitative assay for detecting herpes simplex virus DNA in clinical samples [J].
Ryncarz, AJ ;
Goddard, J ;
Wald, A ;
Huang, ML ;
Roizman, B ;
Corey, L .
JOURNAL OF CLINICAL MICROBIOLOGY, 1999, 37 (06) :1941-1947
[10]  
TANAKA Y, 1994, J JAPANESE SOC COMPU, V7, P1