Organization of a partial S10 operon and its transcriptional analysis in Flavobacterium hibernum strain W22

被引:4
作者
Chen, Shicheng
Bagdasarian, Michael
Kaufman, Michael G.
Walker, Edward D. [1 ]
机构
[1] Michigan State Univ, Dept Microbiol & Mol Genet, E Lansing, MI 48824 USA
[2] Michigan State Univ, Dept Entomol, E Lansing, MI 48824 USA
关键词
ribosomal protein; Flavobacterium hibernum; transcription;
D O I
10.1111/j.1574-6968.2006.00543.x
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A cluster of six genes from Flavobacterium hibernum strain W22, fus-rpsJ-rplC-rplD-rplW-rplB, was cloned and sequenced. A short fragment upstream of rplC, but not of rpsJ, showed strong promoter activity in flavobacteria. TATCTTTG and TTG motifs that are conserved in Flavobacterium promoters were found immediately upstream of the transcription start point of rplC, at the -7 and -33 positions, respectively. RT-PCR analysis of the transcripts revealed that rpsJ and rplC are expressed as separate transcriptional units, whereas rplC and rplD-rplW-rplB are cotranscribed as a single mRNA, in contrast to the situation in the Gammaproteobacteria, which have a single transcriptional unit of 11 ribosomal S10 genes.
引用
收藏
页码:38 / 45
页数:8
相关论文
共 18 条
[1]   Cloning and characterization of the Flavobacterium johnsoniae (Cytophaga johnsonae) gliding motility gene, gldA [J].
Agarwal, S ;
Hunnicutt, DW ;
McBride, MJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (22) :12139-12144
[2]   Phylogenetic analysis of L4-mediated autogenous control of the S10 ribosomal protein operon [J].
Allen, T ;
Shen, P ;
Samsel, L ;
Liu, R ;
Lindahl, L ;
Zengel, JM .
JOURNAL OF BACTERIOLOGY, 1999, 181 (19) :6124-6132
[3]   Regulation of ribosornal protein synthesis in Vibrio cholerae [J].
Allen, TD ;
Watkins, T ;
Lindahl, L ;
Zengel, JM .
JOURNAL OF BACTERIOLOGY, 2004, 186 (17) :5933-5937
[4]  
CHEN SL, IN PRESS APPL ENV MI
[5]   Organisation of the S10, spc and alpha ribosomal protein gene clusters in prokaryotic genomes [J].
Coenye, T ;
Vandamme, P .
FEMS MICROBIOLOGY LETTERS, 2005, 242 (01) :117-126
[6]   ANALYSIS OF ESCHERICHIA-COLI PROMOTER SEQUENCES [J].
HARLEY, CB ;
REYNOLDS, RP .
NUCLEIC ACIDS RESEARCH, 1987, 15 (05) :2343-2361
[7]   Enzymatic conversion of D-galactose to D-tagatose:: heterologous expression and characterisation of a thermostable L-arabinose isomerase from Thermoanaerobacter mathranii [J].
Jorgensen, F ;
Hansen, OC ;
Stougaard, P .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2004, 64 (06) :816-822
[8]   The ecology of Cytophaga-Flavobacteria in aquatic environments [J].
Kirchman, DL .
FEMS MICROBIOLOGY ECOLOGY, 2002, 39 (02) :91-100
[9]   Isolation and characterization of a cold-active xylanase enzyme from Flavobacterium sp. [J].
Lee, CC ;
Smith, M ;
Kibblewhite-Accinelli, R ;
Williams, TG ;
Wagschal, K ;
Robertson, GH ;
Wong, DWS .
CURRENT MICROBIOLOGY, 2006, 52 (02) :112-116
[10]   Vectorette PCR isolation of microsatellite repeat sequences using anchored dinucleotide repeat primers [J].
Lench, NJ ;
Norris, A ;
Bailey, A ;
Booth, A ;
Markham, AF .
NUCLEIC ACIDS RESEARCH, 1996, 24 (11) :2190-2191