Nucleic Acids Research

被引:16
作者
Livny, Jonathan [1 ,2 ]
Waldor, Matthew K. [2 ,3 ]
机构
[1] MIT & Harvard, Broad Inst, Cambridge Ctr 7, Cambridge, MA 02142 USA
[2] Harvard Univ, Med, Brigham & Womens Hosp, Channing Lab, Boston, MA 02115 USA
[3] Howard Hughes Med Inst, Chevy Chase, MD 20815 USA
基金
美国国家卫生研究院;
关键词
ESCHERICHIA-COLI; TRANSCRIPTION ATTENUATION; POLYNUCLEOTIDE PHOSPHORYLASE; TRANSLATIONAL CONTROL; PROTEIN-SYNTHESIS; HIGH-THROUGHPUT; SOLUBLE-RNAS; EXPRESSION; MESSENGER; RIBOSWITCHES;
D O I
10.1093/nar/gkp1121
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:1504 / 1514
页数:11
相关论文
共 47 条
[1]   RibEx: a web server for locating riboswitches and other conserved bacterial regulatory elements [J].
Abreu-Goodger, C ;
Merino, E .
NUCLEIC ACIDS RESEARCH, 2005, 33 :W690-W692
[2]   msDNA-St85, a multicopy single-stranded DNA isolated from Salmonella enterica serovar Typhimurium LT2 with the genomic analysis of its retron [J].
Ahmed, AM ;
Shimamoto, T .
FEMS MICROBIOLOGY LETTERS, 2003, 224 (02) :291-297
[3]   Regulation of ribosornal protein synthesis in Vibrio cholerae [J].
Allen, TD ;
Watkins, T ;
Lindahl, L ;
Zengel, JM .
JOURNAL OF BACTERIOLOGY, 2004, 186 (17) :5933-5937
[4]   Pseudoknot and translational control in the expression of the S15 ribosomal protein [J].
Benard, L ;
Philippe, C ;
Ehresmann, B ;
Ehresmann, C ;
Portier, C .
BIOCHIMIE, 1996, 78 (07) :568-576
[5]   TRANSCRIPTION ATTENUATION IN SALMONELLA-TYPHIMURIUM - THE SIGNIFICANCE OF RARE LEUCINE CODONS IN THE LEU LEADER [J].
CARTER, PW ;
BARTKUS, JM ;
CALVO, JM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (21) :8127-8131
[6]   ACT: the Artemis comparison tool [J].
Carver, TJ ;
Rutherford, KM ;
Berriman, M ;
Rajandream, MA ;
Barrell, BG ;
Parkhill, J .
BIOINFORMATICS, 2005, 21 (16) :3422-3423
[7]   Expanding roles for metabolite-sensing regulatory RNAs [J].
Dambach, Michael D. ;
Winkler, Wade C. .
CURRENT OPINION IN MICROBIOLOGY, 2009, 12 (02) :161-169
[8]   Rfam: updates to the RNA families database [J].
Gardner, Paul P. ;
Daub, Jennifer ;
Tate, John G. ;
Nawrocki, Eric P. ;
Kolbe, Diana L. ;
Lindgreen, Stinus ;
Wilkinson, Adam C. ;
Finn, Robert D. ;
Griffiths-Jones, Sam ;
Eddy, Sean R. ;
Bateman, Alex .
NUCLEIC ACIDS RESEARCH, 2009, 37 :D136-D140
[9]  
GAVINI N, 1991, J BIOL CHEM, V266, P7750
[10]   Rfam: annotating non-coding RNAs in complete genomes [J].
Griffiths-Jones, S ;
Moxon, S ;
Marshall, M ;
Khanna, A ;
Eddy, SR ;
Bateman, A .
NUCLEIC ACIDS RESEARCH, 2005, 33 :D121-D124