CYGD:: the comprehensive Yeast Genome Database

被引:225
作者
Güldener, U
Münsterkötter, M
Kastenmüller, G
Strack, N
van Helden, J
Lemer, C
Richelles, J
Wodak, SJ
García-Martínez, J
Pérez-Ortín, JE
Michael, H
Kaps, A
Talla, E
Dujon, B
André, B
Souciet, JL
De Montigny, J
Bon, E
Gaillardin, C
Mewes, HW
机构
[1] GSF, Natl Res Ctr Environm & Hlth, Inst Bioinformat, D-85764 Neuherberg, Germany
[2] Free Univ Brussels, Serv Conformat Macromol Biol & Bioinformat, B-1050 Brussels, Belgium
[3] Univ Valencia, Dept Bioquim & Biol Mol, E-46100 Burjassot, Spain
[4] Univ Gottingen, UKG, Dept Bioinformat, D-37077 Gottingen, Germany
[5] Biomax Informat AG, D-82152 Martinsried, Germany
[6] CNRS, LCB, F-13402 Marseille 20, France
[7] Univ Paris 06, Inst Pasteur, Unite Genet Mol Levures, CNRS URA 2171, Paris, France
[8] Univ Paris 06, Inst Pasteur, UFR 927, Paris, France
[9] Free Univ Brussels, IBMM, Lab Physiol Cellulaire CP300, B-6041 Gosselies, Belgium
[10] Univ Strasbourg 1, CNRS, Lab Dynam Evolut & Express Genomes Microorgan, FRE 2326, F-67000 Strasbourg, France
[11] CNRS, Lab Genet Mol & Cellulaire, URA 1925, F-78850 Thiverval Grignon, France
[12] INRA, UMR 216, F-78850 Thiverval Grignon, France
[13] Tech Univ Munich, Chair Genome Oriented Bioinformat, Ctr Life & Food Sci, D-85350 Freising Weihenstephan, Germany
关键词
D O I
10.1093/nar/gki053
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Comprehensive Yeast Genome Database (CYGD) compiles a comprehensive data resource for information on the cellular functions of the yeast Saccharomyces cerevisiae and related species, chosen as the best understood model organism for eukaryotes. The database serves as a common resource generated by a European consortium, going beyond the provision of sequence information and functional annotations on individual genes and proteins. In addition, it provides information on the physical and functional interactions among proteins as well as other genetic elements. These cellular networks include metabolic and regulatory pathways, signal transduction and transport processes as well as co-regulated gene clusters. As more yeast genomes are published, their annotation becomes greatly facilitated using S.cerevisiae as a reference. CYGD provides a way of exploring related genomes with the aid of the S.cerevisiae genome as a backbone and SIMAP, the Similarity Matrix of Proteins. The comprehensive resource is available under http://mips.gsf.de/genre/proj/yeast/.
引用
收藏
页码:D364 / D368
页数:5
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