IGF2 antisense transcript expression in porcine postnatal muscle is affected by a quantitative trait nucleotide in intron 3

被引:24
作者
Braunschweig, MH
Van Laere, AS
Buys, N
Andersson, L
Andersson, G
机构
[1] Swedish Univ Agr Sci, Dept Anim Breeding & Genet, SE-75124 Uppsala, Sweden
[2] GENTEC NV, B-9280 Lebbeke, Belgium
[3] Uppsala Univ, BMC, Dept Med Biochem & Microbiol, S-75124 Uppsala, Sweden
基金
瑞典研究理事会;
关键词
imprinting; IGF2; antisense RNA; quantitative trait nucleotide;
D O I
10.1016/j.ygeno.2004.09.006
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A paternally expressed quantitative trait locus (QTL) for muscle mass was mapped to the insulin-like growth factor II (IGF2) locus at the distal end of pig chromosome 2p. It was recently demonstrated that a G to A transition at position intron 3-nt 3072 is the quantitative trait nucleotide (QTN) underlying this QTL. In this study we report for the first time the existence of imprinted porcine IGF2 antisense transcripts (JGF2-AS) and demonstrate that their expression in postnatal muscle is also affected by the QTN. A coregulated expression of IGF2 and IGF2-AS RNAs in muscle and liver with decreasing transcription from fetal to adult age was demonstrated. Further, the significant difference found in expression of IGF2-AS in postnatal muscle between individuals with different QTL genotypes and the lack of significant differences in fetal muscle and liver reflect completely what has been found for IGF2 sense transcripts. (C) 2004 Elsevier Inc. All rights reserved.
引用
收藏
页码:1021 / 1029
页数:9
相关论文
共 13 条
[1]   EXOGENOUS PRIMER-INDEPENDENT CDNA SYNTHESIS WITH COMMERCIAL REVERSE-TRANSCRIPTASE PREPARATIONS ON PLANT-VIRUS RNA TEMPLATES [J].
AGRANOVSKY, AA .
ANALYTICAL BIOCHEMISTRY, 1992, 203 (01) :163-165
[2]   Comparative sequence analysis of the INS-IGF2-H19 gene cluster in pigs [J].
Amarger, V ;
Nguyen, M ;
Van Laere, AS ;
Braunschweig, M ;
Nezer, C ;
Georges, M ;
Andersson, L .
MAMMALIAN GENOME, 2002, 13 (07) :388-398
[3]   Activation of an alternative NF-κB pathway in skeletal muscle during disuse atrophy [J].
Hunter, RB ;
Stevenson, EJ ;
Koncarevic, A ;
Mitchell-Felton, H ;
Essig, DA ;
Kandarian, SC .
FASEB JOURNAL, 2002, 16 (06) :529-538
[4]   A paternally expressed QTL affecting skeletal and cardiac muscle mass in pigs maps to the IGF2 locus [J].
Jeon, JT ;
Carlborg, Ö ;
Törnsten, A ;
Giuffra, E ;
Amarger, V ;
Chardon, P ;
Andersson-Eklund, L ;
Andersson, K ;
Hansson, I ;
Lundström, K ;
Andersson, L .
NATURE GENETICS, 1999, 21 (02) :157-158
[5]   Multiple imprinted sense and antisense transcripts, differential methylation and tandem repeats in a putative imprinting control region upstream of mouse Igf2 [J].
Moore, T ;
Constancia, M ;
Zubair, M ;
Bailleul, B ;
Feil, R ;
Sasaki, H ;
Reik, W .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (23) :12509-12514
[6]   An imprinted QTL with major effect on muscle mass and fat deposition maps to the IGF2 locus in pigs [J].
Nezer, C ;
Moreau, L ;
Brouwers, B ;
Coppieters, W ;
Detilleux, J ;
Hanset, R ;
Karim, L ;
Kvasz, A ;
Leroy, P ;
Georges, M .
NATURE GENETICS, 1999, 21 (02) :155-156
[7]   Expression and imprinting status of human PEG8/IGF2AS, a paternally expressed antisense transcript from the IGF2 locus, in Wilms' tumors [J].
Okutsu, T ;
Kuroiwa, Y ;
Kagitani, F ;
Kai, M ;
Aisaka, K ;
Tsutsumi, O ;
Kaneko, Y ;
Yokomori, K ;
Surani, MA ;
Kohda, T ;
Kaneko-Ishino, T ;
Ishino, F .
JOURNAL OF BIOCHEMISTRY, 2000, 127 (03) :475-483
[8]  
RAGHAVA GPS, 1994, BIOTECHNIQUES, V17, P100
[9]   IDENTIFICATION OF AN ANTISENSE TRANSCRIPT FROM THE IGF-II LOCUS IN MOUSE [J].
RIVKIN, M ;
ROSEN, KM ;
VILLAKOMAROFF, L .
MOLECULAR REPRODUCTION AND DEVELOPMENT, 1993, 35 (04) :394-397
[10]   IDENTIFICATION OF ANTISENSE TRANSCRIPTS OF THE CHICKEN INSULIN-LIKE GROWTH FACTOR-II GENE [J].
TAYLOR, ER ;
SELEIRO, EAP ;
BRICKELL, PM .
JOURNAL OF MOLECULAR ENDOCRINOLOGY, 1991, 7 (02) :145-154