Role of the gut microbiota in defining human health

被引:137
作者
Fujimura, Kei E. [1 ]
Slusher, Nicole A. [1 ]
Cabana, Michael D. [2 ]
Lynch, Susan V. [1 ]
机构
[1] Univ Calif San Francisco, Colitis & Crohns Dis Ctr, Div Gastroenterol, Dept Med, San Francisco, CA 94143 USA
[2] Univ Calif San Francisco, Div Gen Pediat, Dept Pediat, San Francisco, CA 94143 USA
关键词
gastrointestinal tract; inflammation; microneme; probiotics; INFLAMMATORY-BOWEL-DISEASE; NFKB1 PROMOTER POLYMORPHISM; DIET-INDUCED OBESITY; LOW-BIRTH-WEIGHT; NEONATAL ANTIBIOTIC-TREATMENT; CULTURE-INDEPENDENT ANALYSIS; HUMAN COLONIC MICROBIOTA; GENOME-WIDE ASSOCIATION; MUCOSAL IGA RESPONSES; TOLL-LIKE RECEPTORS;
D O I
10.1586/ERI.10.14
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
The human superorganism is a conglomerate of mammalian and microbial cells, with the latter estimated to outnumber the former by ten to one and the microbial genetic repertoire (microbiome) to be approximately 100-times greater than that of the human host. Given the ability of the immune response to rapidly counter infectious agents, it is striking that such a large density of microbes can exist in a state of synergy within the human host. This is particularly true of the distal gastrointestinal (GI) tract, which houses up to 1000 distinct bacterial species and an estimated excess of 1 x 10(14) microorganisms. An ever-increasing body of evidence implicates the GI microbiota in defining states of health and disease. Here, we review the literature in adult and pediatric GI microbiome studies, the emerging links between microbial community structure, function, infection and disease, and the approaches to manipulate this crucial ecosystem to improve host health.
引用
收藏
页码:435 / 454
页数:20
相关论文
共 238 条
[31]   Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation [J].
Brodie, Eoin L. ;
DeSantis, Todd Z. ;
Joyner, Dominique C. ;
Baek, Seung M. ;
Larsen, Joern T. ;
Andersen, Gary L. ;
Hazen, Terry C. ;
Richardson, Paul M. ;
Herman, Donald J. ;
Tokunaga, Tetsu K. ;
Wan, Jiamin M. ;
Firestone, Mary K. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2006, 72 (09) :6288-6298
[32]   Antibiotic treatment partially protects against type 1 diabetes in the Bio-Breeding diabetes-prone rat. Is the gut flora involved in the development of type 1 diabetes? [J].
Brugman, S. ;
Klatter, F. A. ;
Visser, J. T. J. ;
Wildeboer-Veloo, A. C. M. ;
Harmsen, H. J. M. ;
Rozing, J. ;
Bos, N. A. .
DIABETOLOGIA, 2006, 49 (09) :2105-2108
[33]   Allergen exposure in infancy and the development of sensitization, wheeze, and asthma at 4 years [J].
Brussee, JE ;
Smit, HA ;
van Strien, RT ;
Corver, K ;
Kerkhof, M ;
Wijga, AH ;
Aalberse, RC ;
Postma, D ;
Gerritsen, J ;
Grobbee, DE ;
de Jongste, JC ;
Brunekreef, B .
JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY, 2005, 115 (05) :946-952
[34]   Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls [J].
Burton, Paul R. ;
Clayton, David G. ;
Cardon, Lon R. ;
Craddock, Nick ;
Deloukas, Panos ;
Duncanson, Audrey ;
Kwiatkowski, Dominic P. ;
McCarthy, Mark I. ;
Ouwehand, Willem H. ;
Samani, Nilesh J. ;
Todd, John A. ;
Donnelly, Peter ;
Barrett, Jeffrey C. ;
Davison, Dan ;
Easton, Doug ;
Evans, David ;
Leung, Hin-Tak ;
Marchini, Jonathan L. ;
Morris, Andrew P. ;
Spencer, Chris C. A. ;
Tobin, Martin D. ;
Attwood, Antony P. ;
Boorman, James P. ;
Cant, Barbara ;
Everson, Ursula ;
Hussey, Judith M. ;
Jolley, Jennifer D. ;
Knight, Alexandra S. ;
Koch, Kerstin ;
Meech, Elizabeth ;
Nutland, Sarah ;
Prowse, Christopher V. ;
Stevens, Helen E. ;
Taylor, Niall C. ;
Walters, Graham R. ;
Walker, Neil M. ;
Watkins, Nicholas A. ;
Winzer, Thilo ;
Jones, Richard W. ;
McArdle, Wendy L. ;
Ring, Susan M. ;
Strachan, David P. ;
Pembrey, Marcus ;
Breen, Gerome ;
St Clair, David ;
Caesar, Sian ;
Gordon-Smith, Katherine ;
Jones, Lisa ;
Fraser, Christine ;
Green, Elain K. .
NATURE, 2007, 447 (7145) :661-678
[35]   Antibody repertoire development in fetal and neonatal piglets. VIII. Colonization is required for newborn piglets to make serum antibodies to T-dependent and type 2 T-independent antigens [J].
Butler, JE ;
Weber, P ;
Sinkora, M ;
Baker, D ;
Schoenherr, A ;
Mayer, B ;
Francis, D .
JOURNAL OF IMMUNOLOGY, 2002, 169 (12) :6822-6830
[36]   Influence of dog ownership and high endotoxin on wheezing and atopy during infancy [J].
Campo, Paloma ;
Kalra, Harpinder K. ;
Levin, Linda ;
Reponen, Tiina ;
Olds, Rolanda ;
Lummus, Zana L. ;
Cho, Seung-Hyun ;
Hershey, Gurjit K. Khurana ;
Lockey, James ;
Villareal, Manuel ;
Stanforth, Sherry ;
LeMasters, Grace ;
Bernstein, David I. .
JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY, 2006, 118 (06) :1271-1278
[37]   Selective increases of bifidobacteria in gut microflora improve high-fat-diet-induced diabetes in mice through a mechanism associated with endotoxaemia [J].
Cani, P. D. ;
Neyrinck, A. M. ;
Fava, F. ;
Knauf, C. ;
Burcelin, R. G. ;
Tuohy, K. M. ;
Gibson, G. R. ;
Delzenne, N. M. .
DIABETOLOGIA, 2007, 50 (11) :2374-2383
[38]   Changes in gut microbiota control metabolic endotoxemia-induced inflammation in high-fat diet-induced obesity and diabetes in mice [J].
Cani, Patrice D. ;
Bibiloni, Rodrigo ;
Knauf, Claude ;
Neyrinck, Audrey M. ;
Neyrinck, Audrey M. ;
Delzenne, Nathalle M. ;
Burcelin, Remy .
DIABETES, 2008, 57 (06) :1470-1481
[39]   Gut microflora as a target for energy and metabolic homeostasis [J].
Cani, Patrice D. ;
Delzenne, Nathalie M. .
CURRENT OPINION IN CLINICAL NUTRITION AND METABOLIC CARE, 2007, 10 (06) :729-734
[40]   Metabolic endotoxemia initiates obesity and insulin resistance [J].
Cani, Patrice D. ;
Amar, Jacques ;
Iglesias, Miguel Angel ;
Poggi, Marjorie ;
Knauf, Claude ;
Bastelica, Delphine ;
Neyrinck, Audrey M. ;
Fava, Francesca ;
Tuohy, Kieran M. ;
Chabo, Chantal ;
Waget, Aurelie ;
Delmee, Evelyne ;
Cousin, Beatrice ;
Sulpice, Thierry ;
Chamontin, Bernard ;
Ferrieres, Jean ;
Tanti, Jean-Francois ;
Gibson, Glenn R. ;
Casteilla, Louis ;
Delzenne, Nathalie M. ;
Alessi, Marie Christine ;
Burcelin, Remy .
DIABETES, 2007, 56 (07) :1761-1772