Stacking interaction between homostacks of simple aromatics and the factors influencing these interactions

被引:35
作者
Choudhury, Rajul Ranjan [1 ]
Chitra, R. [1 ]
机构
[1] Bhabha Atom Res Ctr, Div Solid State Phys, Bombay 400085, Maharashtra, India
来源
CRYSTENGCOMM | 2010年 / 12卷 / 07期
关键词
PI-PI STACKING;
D O I
10.1039/b919793a
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The intermolecular pi-pi stacking interactions within the homostacks (X-X type stacking) of simple aromatic molecules in crystal structures extracted from the Cambridge crystallographic database are reported here. It is found that the stacking interactions in crystals of simple aromatic hydrocarbons become important only for molecules with more than three rings. Whereas for crystals of nitrogen substituted heterocyclic aromatic molecule, the stacking interactions become important for doubly substituted single ringed molecules itself. We investigated some of the factors that affect the stacking interactions between these molecules viz the substitution of a hydrogen atom of a simple aromatic hydrocarbons and the formation of a hydrogen bonds were the nitrogen substituted heterocyclic aromatic molecule acts as a hydrogen bond acceptor. Molecular electron density parameters obtained from the theoretical quantum calculations using the package GAMESS UK are used to explain the results obtained from data mining.
引用
收藏
页码:2113 / 2121
页数:9
相关论文
共 14 条
[11]   Influence of the π-π interaction on the hydrogen bonding capacity of stacked DNA/RNA bases [J].
Mignon, P ;
Loverix, S ;
Steyaert, J ;
Geerlings, P .
NUCLEIC ACIDS RESEARCH, 2005, 33 (06) :1779-1789
[12]   A simple ring current model for describing in-plane aromaticity in pericyclic reactions [J].
Morao, I ;
Cossío, FP .
JOURNAL OF ORGANIC CHEMISTRY, 1999, 64 (06) :1868-1874
[13]   Molden: a pre- and post-processing program for molecular and electronic structures [J].
Schaftenaar, G ;
Noordik, JH .
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 2000, 14 (02) :123-134
[14]   Electron density distribution in stacked benzene dimers: A new approach towards the estimation of stacking interaction energies [J].
Zhikol, OA ;
Shishkin, OV ;
Lyssenko, KA ;
Leszczynski, J .
JOURNAL OF CHEMICAL PHYSICS, 2005, 122 (14)