Lesser known relatives of miRNA

被引:24
作者
Choudhuri, Supratim [1 ,2 ]
机构
[1] US FDA, Ctr Food Safety & Appl Nutr, Div Biotechnol, College Pk, MD 20740 USA
[2] DBGNR, GRAS Notice Review, OFAS, College Pk, MD 20740 USA
关键词
piRNA; ra-siRNA; ta-siRNA; nat-siRNA; hc-siRNA; scnRNA; qiRNA; SMALL RNAS; ANTISENSE TRANSCRIPTS; SILENCING PATHWAYS; BIOGENESIS; SIRNAS;
D O I
10.1016/j.bbrc.2009.08.039
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Since the discovery of RNAi (RNA interference) major attention has focused on studying miRNA (microRNA) and siRNA (small interfering RNA). However, within the last few years, several other small ncRNAs (non-coding RNAs) have been discovered and thus various newer acronyms representing these 'other' classes of small ncRNAs have populated the literature. Of these, piRNA (Piwi-interacting RNA) has been gaining importance because of its role as the guardian of the germline genome. Some of the other newly discovered small ncRNAs have been mostly reported in plants, and they are yet to be studied more comprehensively. Nevertheless, piRNA and the 'other' small ncRNAs deserve some discussion because they are members of the increasingly large family of small ncRNAs. (C) Published by Elsevier Inc.
引用
收藏
页码:177 / 180
页数:4
相关论文
共 20 条
[1]   The small RNA profile during Drosophila melanogaster development [J].
Aravin, AA ;
Lagos-Quintana, M ;
Yalcin, A ;
Zavolan, M ;
Marks, D ;
Snyder, B ;
Gaasterland, T ;
Meyer, J ;
Tuschl, T .
DEVELOPMENTAL CELL, 2003, 5 (02) :337-350
[2]   A novel class of small RNAs bind to MILI protein in mouse testes [J].
Aravin, Alexei ;
Gaidatzis, Dimos ;
Pfeffer, Sebastien ;
Lagos-Quintana, Mariana ;
Landgraf, Pablo ;
Iovino, Nicola ;
Morris, Patricia ;
Brownstein, Michael J. ;
Kuramochi-Miyagawa, Satomi ;
Nakano, Toru ;
Chien, Minchen ;
Russo, James J. ;
Ju, Jingyue ;
Sheridan, Robert ;
Sander, Chris ;
Zavolan, Mihaela ;
Tuschl, Thomas .
NATURE, 2006, 442 (7099) :203-207
[3]   The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race [J].
Aravin, Alexei A. ;
Hannon, Gregory J. ;
Brennecke, Julius .
SCIENCE, 2007, 318 (5851) :761-764
[4]   Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis [J].
Borsani, O ;
Zhu, JH ;
Verslues, PE ;
Sunkar, R ;
Zhu, JK .
CELL, 2005, 123 (07) :1279-1291
[5]  
Brennecke J, 2007, CELL, V128, P1089, DOI 10.1016/j.cell.2007.01.043
[6]   The diversity of RNA silencing pathways in plants [J].
Brodersen, Peter ;
Voinnet, Olivier .
TRENDS IN GENETICS, 2006, 22 (05) :268-280
[7]   A stepwise pathway for biogenesis of 24-nt secondary siRNAs and spreading of DNA methylation [J].
Daxinger, Lucia ;
Kanno, Tatsuo ;
Bucher, Etienne ;
van der Winden, Johannes ;
Naumann, Ulf ;
Matzke, Antonius J. M. ;
Matzke, Marjori .
EMBO JOURNAL, 2009, 28 (01) :48-57
[8]   Small silencing RNAs: an expanding universe [J].
Ghildiyal, Megha ;
Zamore, Phillip D. .
NATURE REVIEWS GENETICS, 2009, 10 (02) :94-108
[9]   A slicer-mediated mechanism for repeat-associated siRNA 5′ end formation in Drosophila [J].
Gunawardane, Lalith S. ;
Saito, Kuniaki ;
Nishida, Kazumichi M. ;
Miyoshi, Keita ;
Kawamura, Yoshinori ;
Nagami, Tomoko ;
Siomi, Haruhiko ;
Siomi, Mikiko C. .
SCIENCE, 2007, 315 (5818) :1587-1590
[10]   Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis [J].
Jin, Hailing ;
Vacic, Vladimir ;
Girke, Thomas ;
Lonardi, Stefano ;
Zhu, Jian-Kang .
BMC MOLECULAR BIOLOGY, 2008, 9