Evidence of Diketopiperazine and Oxazolone Structures for HA b2+ Ion

被引:91
作者
Perkins, Brittany R. [1 ]
Chamot-Rooke, Julia [2 ]
Yoon, Sung Hwan [1 ]
Gucinski, Ashley C. [1 ]
Somogyi, Arpad [1 ]
Wysocki, Vicki H. [1 ]
机构
[1] Univ Arizona, Dept Chem & Biochem, Tucson, AZ 85721 USA
[2] Ecole Polytech, CNRS, Lab Mecanismes Reactionnels, Dept Chem, F-91128 Palaiseau, France
关键词
COLLISION-INDUCED DISSOCIATION; ELECTRON-CAPTURE DISSOCIATION; MAIN FRAGMENTATION PATHWAYS; INFRARED-SPECTROSCOPY; PROTONATED PEPTIDES; MASS-SPECTROMETRY; AMIDE BOND; AB-INITIO; MECHANISMS; PRODUCTS;
D O I
10.1021/ja9054542
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
(Graph Presented) Peptide fragmentation can lead to an oxazolone or diketopiperazine b2+ ion structure. IRMPD spectroscopy combined with computational modeling and gas-phase H/D exchange was used to study the structure of the b2+ ion from protonated HAAAA. The experimental spectrum of the b2+ ion matches both the experimental spectrum for the protonated cyclic dipeptide HA (a commercial diketopiperazine) and the theoretical spectrum for a diketopiperazine protonated at the imidazole pi nitrogen. A characteristic band at 1875 cm-1 and increased abundance of the peaks at 1619 and 1683 cm-1 indicate a second population corresponding to an oxazolone species. H/D exchange also shows a mixture of two populations consistent with a mixture of b2 + ion diketopiperazine and oxazolone structures. © 2009 American Chemical Society.
引用
收藏
页码:17528 / 17529
页数:2
相关论文
共 29 条
[1]   Backbone cleavages of carbon monoxide and sequential loss and ammonia from protonated AGG: A combined tandem mass spectrometry, isotope labeling, and theoretical study [J].
Bythell, Benjamin J. ;
Barofsky, Douglas F. ;
Pingitore, Francesco ;
Polce, Michael J. ;
Wang, Ping ;
Wesdemiotis, Chrys ;
Paizs, Bela .
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2007, 18 (07) :1291-1303
[2]   Infrared Spectroscopy of Fragments from Doubly Protonated Tryptic Peptides [J].
Bythell, Benjamin J. ;
Erlekam, Undine ;
Paizs, Bela ;
Maitre, Philippe .
CHEMPHYSCHEM, 2009, 10 (06) :883-885
[3]   Deuterium exchange reactions as a probe of biomolecule structure. Fundamental studies of cas phase H/D exchange reactions of protonated glycine oligomers with D2O, CD3OD, CD3CO2D, and ND3 [J].
Campbell, S ;
Rodgers, MT ;
Marzluff, EM ;
Beauchamp, JL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (51) :12840-12854
[4]   Mass spectrometric and quantum mechanical analysis of gas-phase formation, structure, and decomposition of various b2 ions and their specifically deuterated analogs [J].
Eckart, K ;
Holthausen, MC ;
Koch, W ;
Spiess, J .
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 1998, 9 (10) :1002-1011
[5]   Fragmentation mechanisms of product ions from protonated tripeptides [J].
El Aribi, H ;
Orlova, G ;
Rodriquez, CF ;
Almeida, DRP ;
Hopkinson, AC ;
Siu, KWM .
JOURNAL OF PHYSICAL CHEMISTRY B, 2004, 108 (48) :18743-18749
[6]   Elucidation of fragmentation mechanisms of protonated peptide ions and their products: A case study on glycylglycylglycine using density functional theory and threshold collision-induced dissociation [J].
El Aribi, H ;
Rodriquez, CF ;
Almeida, DRP ;
Ling, Y ;
Mak, WWN ;
Hopkinson, AC ;
Siu, KWM .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (30) :9229-9236
[7]   Side-chain involvement in the fragmentation reactions of the protonated methyl esters of histidine and its peptides [J].
Farrugia, JM ;
Taverner, T ;
O'Hair, RAJ .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2001, 209 (2-3) :99-112
[8]   Do all b2 ions have oxazolone structures?: Multistage mass spectrometry and ab initio studies on protonated N-acyl amino acid methyl ester model systems [J].
Farrugia, JM ;
O'Hair, RAJ ;
Reid, GE .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2001, 210 (1-3) :71-87
[9]  
Frisch M. J., 2004, GAUSSIAN 03
[10]   Structure of Electron-Capture Dissociation Fragments from Charge-Tagged Peptides Probed by Tunable Infrared Multiple Photon Dissociation [J].
Frison, Gilles ;
van der Rest, Guillaume ;
Turecek, Frantisek ;
Besson, Thierry ;
Lemaire, Joel ;
Maitre, Philippe ;
Chamot-Rooke, Julia .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2008, 130 (45) :14916-+