Cloning and characterization of a gene cluster for geldanamycin production in Streptomyces hygroscopicus NRRL 3602

被引:137
作者
Rascher, A
Hu, ZH
Viswanathan, N
Schirmer, A
Reid, R
Nierman, WC
Lewis, M
Hutchinson, CR
机构
[1] Kosan Biosci, Hayward, CA 94545 USA
[2] Inst Genome Res, Rockville, MD 20850 USA
关键词
ansamycin; antitumor; biosynthesis; cancer chemotherapy; Hsp90; polyketide synthase;
D O I
10.1016/S0378-1097(02)01148-5
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
We illustrate the use of a PCR-based method by which the genomic DNA of a microorganism can be rapidly queried for the presence of type I modular polyketide synthase genes to clone and characterize, by sequence analysis and gene disruption, a major portion of the geldanamycin production gene cluster from Streptomyces hygroscopicus var. geldanus NRRL 3602. (C) 2002 Federation of European Microbiological Societies. Published by Elsevier Science B.V. All rights reserved.
引用
收藏
页码:223 / 230
页数:8
相关论文
共 43 条
[1]   The loading and initial elongation modules of rifamycin synthetase collaborate to produce mixed aryl ketide products-1 [J].
Admiraal, SJ ;
Khosla, C ;
Walsh, CT .
BIOCHEMISTRY, 2002, 41 (16) :5313-5324
[2]   The loading module of rifamycin synthetase is an adenylation-thiolation didomain with substrate tolerance for substituted benzoates [J].
Admiraal, SJ ;
Walsh, CT ;
Khosla, C .
BIOCHEMISTRY, 2001, 40 (20) :6116-6123
[3]   CLONING AND ANALYSIS OF DNA-SEQUENCES FROM STREPTOMYCES-HYGROSCOPICUS ENCODING GELDANAMYCIN BIOSYNTHESIS [J].
ALLEN, IW ;
RITCHIE, DA .
MOLECULAR AND GENERAL GENETICS, 1994, 243 (05) :593-599
[4]  
ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[5]   Biosynthesis of the ansamycin antibiotic rifamycin: deductions from the molecular analysis of the rif biosynthetic gene cluster of Amycolatopsis mediterranei S699 [J].
August, PR ;
Tang, L ;
Yoon, YJ ;
Ning, S ;
Muller, R ;
Yu, TW ;
Taylor, M ;
Hoffmann, D ;
Kim, CG ;
Zhang, XH ;
Hutchinson, CR ;
Floss, HG .
CHEMISTRY & BIOLOGY, 1998, 5 (02) :69-79
[6]   Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2) [J].
Bentley, SD ;
Chater, KF ;
Cerdeño-Tárraga, AM ;
Challis, GL ;
Thomson, NR ;
James, KD ;
Harris, DE ;
Quail, MA ;
Kieser, H ;
Harper, D ;
Bateman, A ;
Brown, S ;
Chandra, G ;
Chen, CW ;
Collins, M ;
Cronin, A ;
Fraser, A ;
Goble, A ;
Hidalgo, J ;
Hornsby, T ;
Howarth, S ;
Huang, CH ;
Kieser, T ;
Larke, L ;
Murphy, L ;
Oliver, K ;
O'Neil, S ;
Rabbinowitsch, E ;
Rajandream, MA ;
Rutherford, K ;
Rutter, S ;
Seeger, K ;
Saunders, D ;
Sharp, S ;
Squares, R ;
Squares, S ;
Taylor, K ;
Warren, T ;
Wietzorrek, A ;
Woodward, J ;
Barrell, BG ;
Parkhill, J ;
Hopwood, DA .
NATURE, 2002, 417 (6885) :141-147
[7]   PLASMID CLONING VECTORS FOR THE CONJUGAL TRANSFER OF DNA FROM ESCHERICHIA-COLI TO STREPTOMYCES SPP [J].
BIERMAN, M ;
LOGAN, R ;
OBRIEN, K ;
SENO, ET ;
RAO, RN ;
SCHONER, BE .
GENE, 1992, 116 (01) :43-49
[8]   Identification of a set of genes involved in the formation of the substrate for the incorporation of the unusual "glycolate" chain extension unit in ansamitocin biosynthesis [J].
Carroll, BJ ;
Moss, SJ ;
Bai, LQ ;
Kato, Y ;
Toelzer, S ;
Yu, TW ;
Floss, HG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (16) :4176-4177
[9]   Biosynthesis of ansatrienin (mycotrienin) and naphthomycin -: Identification and analysis of two separate biosynthetic gene clusters in Streptomyces collinus Tu 1892 [J].
Chen, S ;
von Bamberg, D ;
Hale, V ;
Breuer, M ;
Hardt, B ;
Müller, R ;
Floss, HG ;
Reynolds, KA ;
Leistner, E .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1999, 261 (01) :98-107
[10]   GELDANAMYCIN, A NEW ANTIBIOTIC [J].
DEBOER, C ;
MEULMAN, PA ;
WNUK, RJ ;
PETERSON, DH .
JOURNAL OF ANTIBIOTICS, 1970, 23 (09) :442-&