The multifunctional protein p54nrb/PSF recruits the exonuclease XRN2 to facilitate pre-mRNA 3′ processing and transcription termination

被引:145
作者
Kaneko, Syuzo
Rozenblatt-Rosen, Orit
Meyerson, Matthew
Manley, James L. [1 ]
机构
[1] Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
[2] Harvard Univ, Sch Med, Dept Med Oncol, Dana Farber Canc Inst, Boston, MA 02115 USA
[3] Harvard Univ, Sch Med, Dept Pathol, Boston, MA 02115 USA
关键词
RNA polymerase II; pre-mRNA 3 ' processing; XRN2; p54nrb/NonO; PSF;
D O I
10.1101/gad.1565207
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Termination of RNA polymerase II transcription frequently requires a poly( A) signal and cleavage/polyadenylation factors. Recent work has shown that degradation of the downstream cleaved RNA by the exonuclease XRN2 promotes termination, but how XRN2 functions with 3'-processing factors to elicit termination remains unclear. Here we show that XRN2 physically associates with 3'-processing factors and accumulates at the 3' end of a transcribed gene. In vitro 3'-processing assays show that XRN2 is necessary to degrade the downstream RNA, but is not required for 3' cleavage. Significantly, degradation of the 3'-cleaved RNA was stimulated when coupled to cleavage. Unexpectedly, while investigating how XRN2 is recruited to the 3'-processing machinery, we found that XRN2 associates with p54nrb/NonO(p54)-protein-associated splicing factor (PSF), multifunctional proteins involved in several nuclear processes. Strikingly, p54 is also required for degradation of the 3'-cleaved RNA in vitro. p54 is present along the length of genes, and small interfering RNA (siRNA)-mediated knockdown leads to defects in XRN2 recruitment and termination. Together, our data indicate that p54nrb/PSF functions in recruitment of XRN2 to facilitate pre-mRNA 3' processing and transcription termination.
引用
收藏
页码:1779 / 1789
页数:11
相关论文
共 59 条
[1]   Phosphorylation of serine 2 within the RNA polymerase IIC-terminal domain couples transcription and 3′ end processing [J].
Ahn, SH ;
Kim, M ;
Buratowski, S .
MOLECULAR CELL, 2004, 13 (01) :67-76
[2]   Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae [J].
Barillà, D ;
Lee, BA ;
Proudfoot, NJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (02) :445-450
[3]   A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates [J].
Bashkirov, VI ;
Scherthan, H ;
Solinger, JA ;
Buerstedde, JM ;
Heyer, WD .
JOURNAL OF CELL BIOLOGY, 1997, 136 (04) :761-773
[4]   Coupling termination of transcription to messenger RNA maturation in yeast [J].
Birse, CE ;
Minvielle-Sebastia, L ;
Lee, BA ;
Keller, W ;
Proudfoot, NJ .
SCIENCE, 1998, 280 (5361) :298-301
[5]   Identification of a regulated pathway for nuclear pre-mRNA turnover [J].
Bousquet-Antonelli, C ;
Presutti, C ;
Tollervey, D .
CELL, 2000, 102 (06) :765-775
[6]   Connections between mRNA 3′ end processing and transcription termination [J].
Buratowski, S .
CURRENT OPINION IN CELL BIOLOGY, 2005, 17 (03) :257-261
[7]   A FUNCTIONAL MESSENGER-RNA POLYADENYLATION SIGNAL IS REQUIRED FOR TRANSCRIPTION TERMINATION BY RNA POLYMERASE-II [J].
CONNELLY, S ;
MANLEY, JL .
GENES & DEVELOPMENT, 1988, 2 (04) :440-452
[8]   Yhh1p/Cft1p directly links poly(A) site recognition and RNA polymerase II transcription termination [J].
Dichtl, B ;
Blank, D ;
Sadowski, M ;
Hübner, W ;
Weiser, S ;
Keller, W .
EMBO JOURNAL, 2002, 21 (15) :4125-4135
[9]   ACCURATE TRANSCRIPTION INITIATION BY RNA POLYMERASE-II IN A SOLUBLE EXTRACT FROM ISOLATED MAMMALIAN NUCLEI [J].
DIGNAM, JD ;
LEBOVITZ, RM ;
ROEDER, RG .
NUCLEIC ACIDS RESEARCH, 1983, 11 (05) :1475-1489
[10]   PURIFICATION AND CDNA CLONING OF HELA-CELL P54(NRB), A NUCLEAR-PROTEIN WITH 2 RNA RECOGNITION MOTIFS AND EXTENSIVE HOMOLOGY TO HUMAN SPLICING FACTOR PSF AND DROSOPHILA NONA/BJ6 [J].
DONG, BH ;
HOROWITZ, DS ;
KOBAYASHI, R ;
KRAINER, AR .
NUCLEIC ACIDS RESEARCH, 1993, 21 (17) :4085-4092