GENOTYPE and GENODIVE: two programs for the analysis of genetic diversity of asexual organisms

被引：1624

作者：

Meirmans, PG ^{[1
]}

Van Tienderen, PH ^{[1
]}

机构：

[1] Univ Amsterdam, Inst Biodivers & Ecosyst Dynam, NL-1098 SM Amsterdam, Netherlands

来源：

MOLECULAR ECOLOGY NOTES | 2004年 / 4卷 / 04期

关键词：

asexuals; clonal diversity; clones; genotypes; software;

D O I：

10.1111/j.1471-8286.2004.00770.x

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Investigating diversity in asexual organisms using molecular markers involves.the assignment of individuals to clonal lineages and the subsequent analysis of clonal diversity. Assignment is possible using a distance matrix in combination with a user-specified threshold, defined as the maximum distance between two individuals that are considered to belong to the same clonal lineage. Analysis of clonal diversity requires tests for differences in diversity and clonal composition between populations. We developed two programs, GENOTYPE and GENODIVE for such analyses of clonal diversity in asexually reproducing organisms. Additionally, GENOTYPE can be used for detecting genotyping errors in studies of sexual organisms.

引用

页码：792 / 794

页数：3

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