Sequencing exons 5 to 8 of the p53 gene by MALDI-TOF mass spectrometry

被引:102
作者
Fu, DJ [1 ]
Tang, K
Braun, A
Reuter, D
Darnhofer-Demar, B
Little, DP
O'Donnell, MJ
Cantor, CR
Köster, H
机构
[1] Sequenom Inc, San Diego, CA 92121 USA
[2] Boston Univ, Ctr Adv Biotechnol, Boston, MA 02215 USA
关键词
genomics; DNA analysis; gene mutation;
D O I
10.1038/nbt0498-381
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Matrix-assisted laser desorption ionization time of flight mass spectrometry was used to sequence exons 5 to 8 of the human p53 gene. A single tube procedure was established for target amplification and mass spectrometric (MS) sequencing. The MS sequencing scheme is designed for high throughput and parallel sample processing, and is amenable to full automation. Reliable sequencing data were obtained using fmol sample amounts. The high resolution and accuracy of MS sequencing was demonstrated by direct sequencing of a heterozygous template.
引用
收藏
页码:381 / 384
页数:4
相关论文
共 34 条
  • [11] Hurst GB, 1996, RAPID COMMUN MASS SP, V10, P377, DOI 10.1002/(SICI)1097-0231(199602)10:3<377::AID-RCM481>3.3.CO
  • [12] 2-O
  • [13] Detection of hepatitis B virus DNA in serum samples via nested PCR and MALDI-TOF mass spectrometry
    Jurinke, C
    Zollner, B
    Feucht, HH
    Jacob, A
    Kirchhubel, J
    Luchow, A
    vandenBoom, D
    Laufs, R
    Koster, H
    [J]. GENETIC ANALYSIS-BIOMOLECULAR ENGINEERING, 1996, 13 (03): : 67 - 71
  • [14] Analysis of ligase chain reaction products via matrix-assisted laser desorption/ionization time-of-flight-mass spectrometry
    Jurinke, C
    vandenBoom, D
    Jacob, A
    Tang, K
    Worl, R
    Koster, H
    [J]. ANALYTICAL BIOCHEMISTRY, 1996, 237 (02) : 174 - 181
  • [15] LASER DESORPTION IONIZATION OF PROTEINS WITH MOLECULAR MASSES EXCEEDING 10000 DALTONS
    KARAS, M
    HILLENKAMP, F
    [J]. ANALYTICAL CHEMISTRY, 1988, 60 (20) : 2299 - 2301
  • [16] A strategy for rapid and efficient DNA sequencing by mass spectrometry
    Koster, H
    Tang, K
    Fu, DJ
    Braun, A
    vandenBoom, D
    Smith, CL
    Cotter, RJ
    Cantor, CR
    [J]. NATURE BIOTECHNOLOGY, 1996, 14 (09) : 1123 - 1128
  • [17] Little DP, 1997, EUR J CLIN CHEM CLIN, V35, P545
  • [18] MALDI on a chip: Analysis of arrays of low femtomole to subfemtomole quantities of synthetic oligonucleotides and DNA diagnostic products dispensed by a piezoelectric pipet
    Little, DP
    Cornish, TJ
    ODonnell, MJ
    Braun, A
    Cotter, RJ
    Koster, H
    [J]. ANALYTICAL CHEMISTRY, 1997, 69 (22) : 4540 - 4546
  • [19] Detection of RET proto-oncogene codon 634 mutations using mass spectrometry
    Little, DP
    Braun, A
    DarnhoferDemar, B
    Frilling, A
    Li, YZ
    McIver, RT
    Koster, H
    [J]. JOURNAL OF MOLECULAR MEDICINE-JMM, 1997, 75 (10): : 745 - 750
  • [20] RAPID SCREENING OF GENETIC POLYMORPHISMS USING BUCCAL CELL-DNA WITH DETECTION BY MATRIX-ASSISTED LASER-DESORPTION IONIZATION MASS-SPECTROMETRY
    LIU, YH
    ZHU, YD
    LIANG, XO
    SIEMIENIAK, D
    VENTA, PJ
    LUBMAN, DM
    [J]. RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 1995, 9 (09) : 735 - 743