HumanMSD and MouseMSD: generating genetic maps for human and murine microsatellite markers

被引:3
作者
Bahlo, M
Xing, L [1 ]
Wilkinson, CR
机构
[1] Walter & Eliza Hall Inst Med Res, Div Genet & Bioinformat, Parkville, Vic 3050, Australia
[2] Womens & Childrens Hosp, CHRI, Adelaide, SA 5006, Australia
[3] Womens & Childrens Hosp, Cooperat Ctr Discovery Genes Common Human Dis, Adelaide, SA 5006, Australia
[4] Univ Adelaide, Sch Math Sci, Microarray Anal Grp, Adelaide, SA 5005, Australia
关键词
D O I
10.1093/bioinformatics/bth375
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We present two Web interfaces that generate genetic maps for given sets of human or mouse microsatellite markers. The genetic maps are generated from available databases using linear interpolation of physical map distances to infer genetic map positions for missing markers in these databases.
引用
收藏
页码:3280 / 3283
页数:4
相关论文
共 10 条
[1]   Merlin-rapid analysis of dense genetic maps using sparse gene flow trees [J].
Abecasis, GR ;
Cherny, SS ;
Cookson, WO ;
Cardon, LR .
NATURE GENETICS, 2002, 30 (01) :97-101
[2]   Comprehensive human genetic maps: Individual and sex-specific variation in recombination [J].
Broman, KW ;
Murray, JC ;
Sheffield, VC ;
White, RL ;
Weber, JL .
AMERICAN JOURNAL OF HUMAN GENETICS, 1998, 63 (03) :861-869
[3]   R/qtl: QTL mapping in experimental crosses [J].
Broman, KW ;
Wu, H ;
Sen, S ;
Churchill, GA .
BIOINFORMATICS, 2003, 19 (07) :889-890
[4]   The map problem: A comparison of genetic and sequence-based physical maps [J].
DeWan, AT ;
Parrado, AR ;
Matise, TC ;
Leal, SM .
AMERICAN JOURNAL OF HUMAN GENETICS, 2002, 70 (01) :101-107
[5]   A comprehensive genetic map of the human genome based on 5,264 microsatellites [J].
Dib, C ;
Faure, S ;
Fizames, C ;
Samson, D ;
Drouot, N ;
Vignal, A ;
Millasseau, P ;
Marc, S ;
Hazan, J ;
Seboun, E ;
Lathrop, M ;
Gyapay, G ;
Morissette, J ;
Weissenbach, J .
NATURE, 1996, 380 (6570) :152-154
[6]  
Ihaka R., 1996, J COMPUTATIONAL GRAP, V5, P299, DOI [10.1080/10618600.1996.10474713, 10.2307/1390807, DOI 10.1080/10618600.1996.10474713]
[7]   A high-resolution recombination map of the human genome [J].
Kong, A ;
Gudbjartsson, DF ;
Sainz, J ;
Jonsdottir, GM ;
Gudjonsson, SA ;
Richardsson, B ;
Sigurdardottir, S ;
Barnard, J ;
Hallbeck, B ;
Masson, G ;
Shlien, A ;
Palsson, ST ;
Frigge, ML ;
Thorgeirsson, TE ;
Gulcher, JR ;
Stefansson, K .
NATURE GENETICS, 2002, 31 (03) :241-247
[8]  
KRUGLYAK L, 1995, AM J HUM GENET, V56, P519
[9]   SYSTEMATIC DETECTION OF ERRORS IN GENETIC-LINKAGE DATA [J].
LINCOLN, SE ;
LANDER, ES .
GENOMICS, 1992, 14 (03) :604-610
[10]   Large-scale integration of human genetic and physical maps [J].
Nievergelt, CM ;
Smith, DW ;
Kohlenberg, JB ;
Schork, NJ .
GENOME RESEARCH, 2004, 14 (06) :1199-1205