Molecular Proteomics Imaging of Tumor Interfaces by Mass Spectrometry

被引:66
作者
Kang, Suki [1 ]
Shim, Hyo Sup [1 ]
Lee, Jong Sik [2 ]
Kim, Dong Su [3 ]
Kim, Hak Yong [4 ]
Hong, Seong Hyun [4 ]
Kim, Pan Soo [4 ]
Yoon, Joo Heon [5 ]
Cho, Nam Hoon [1 ,5 ,6 ]
机构
[1] Yonsei Univ, Coll Med, Dept Pathol, Seoul, South Korea
[2] Bruker BioSci Korea Co Ltd, Dalton Div, Seoul, South Korea
[3] Genomine Inc, Genomine Res Div, Pohang Technopk, Pohang, South Korea
[4] Gyeonggi Bioctr, Instrument Support Team, Suwon, South Korea
[5] Yonsei Univ, Coll Med, Res Ctr Human Nat Def Syst, Seoul, South Korea
[6] Brain Korea 21 Project Med Sci, Seoul, South Korea
关键词
MALDI-IMS; interface; 2-dimensional gel electrophoresis; ovarian cancer; DIRECT TISSUE-ANALYSIS; PROTEIN EXPRESSION; PEPTIDES; SECTIONS; IDENTIFICATION; SAMPLES; GENE; TOOL;
D O I
10.1021/pr900666q
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The specific molecular profiles of ovarian cancer interface zones (2), the region between tumors and normal tissues, were evaluated using a new method involving matrix-assisted laser desorption/ionization (MALDI)-imaging mass spectrometry (IMS). We analyzed three ovarian serous carcinomas using MALDI-IMS. Principal component analysis (PCA) was used to evaluate the quality of tissue spatial features based on MALDI-IMS, and for analysis of large data sets of MALDI-IMS. Two-dimensional gel electrophoresis and fluorescence microscopy were used to verify interface-specific proteins. Unique profiles were identified for the tumors, the normal zone, and the IZ. Through MALDI analysis, two interfacespecific proteins, plastin 2 and peroxiredoxin 1 (PRDX 1), were identified as differentially regulated between zones. Fluorescence microscopy revealed high expression levels of plastin 2 and PRDX 1 along the IZ of ovarian tumors. This comparative proteomics study using tissue MALDI-IMS suggested that the IZ is different from the adjacent tumor and normal zones, and that plastin 2 and PRDX 1 may be interface markers specific to ovarian tumors.
引用
收藏
页码:1157 / 1164
页数:8
相关论文
共 38 条
[11]   Three-dimensional visualization of protein expression in mouse brain structures using imaging mass spectrometry [J].
Crecelius, AC ;
Cornett, DS ;
Caprioli, RM ;
Williams, B ;
Dawant, BM ;
Bodenheimer, B .
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2005, 16 (07) :1093-1099
[12]   Molecular and pathological signatures of epithelial-mesenchymal transitions at the cancer invasion front [J].
De Wever, Olivier ;
Pauwels, Patrick ;
De Craene, Bram ;
Sabbah, Michele ;
Emami, Shahin ;
Redeuilh, Gerard ;
Gespach, Christian ;
Bracke, Marc ;
Berx, Geert .
HISTOCHEMISTRY AND CELL BIOLOGY, 2008, 130 (03) :481-494
[13]   Peroxiredoxin I, platelet-derived growth factor A, and platelet-derived growth factor receptor α are overexpressed in carcinoma ex pleomorphic adenoma: association with malignant transformation [J].
Dias Demasi, Ana Paula ;
Furuse, Cristiane ;
Soares, Andresa B. ;
Altemani, Albina ;
Araujo, Vera C. .
HUMAN PATHOLOGY, 2009, 40 (03) :390-397
[14]   Intra- and interspecific variation in primate gene expression patterns [J].
Enard, W ;
Khaitovich, P ;
Klose, J ;
Zöllner, S ;
Heissig, F ;
Giavalisco, P ;
Nieselt-Struwe, K ;
Muchmore, E ;
Varki, A ;
Ravid, R ;
Doxiadis, GM ;
Bontrop, RE ;
Pääbo, S .
SCIENCE, 2002, 296 (5566) :340-343
[15]   Routine identification of proteins from sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) gels or polyvinyl difluoride membranes using matrix assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF-MS) [J].
Fernandez, J ;
Gharahdaghi, F ;
Mische, SM .
ELECTROPHORESIS, 1998, 19 (06) :1036-1045
[16]   Characterization of recombinant human serum albumin using matrix-assisted laser desorption ionization time-of-flight mass spectrometry [J].
Flensburg, J ;
Belew, M .
JOURNAL OF CHROMATOGRAPHY A, 2003, 1009 (1-2) :111-117
[17]   Statistical classification and visualization of MALDI-Imaging data [J].
Gerhard, Marc ;
Deininger, Soeren-Oliver ;
Schleif, Frank-Michael .
TWENTIETH IEEE INTERNATIONAL SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS, PROCEEDINGS, 2007, :403-+
[18]   TAU-PROTEINS OF ALZHEIMER PAIRED HELICAL FILAMENTS - ABNORMAL PHOSPHORYLATION OF ALL 6 BRAIN ISOFORMS [J].
GOEDERT, M ;
SPILLANTINI, MG ;
CAIRNS, NJ ;
CROWTHER, RA .
NEURON, 1992, 8 (01) :159-168
[19]   Protein and peptides in pictures: Imaging with MALDI mass spectrometry [J].
Goodwin, Richard J. A. ;
Pennington, Stephen R. ;
Pitt, Andrew R. .
PROTEOMICS, 2008, 8 (18) :3785-3800
[20]   Direct tissue analysis by matrix-assisted laser desorption ionization mass spectrometry: Application to kidney biology [J].
Herring, Kristen D. ;
Oppenheimer, Stacey R. ;
Caprioli, Richard M. .
SEMINARS IN NEPHROLOGY, 2007, 27 (06) :597-608