Small RNA Database

被引:15
作者
Gu, J [1 ]
Chen, YH [1 ]
Reddy, R [1 ]
机构
[1] Baylor Coll Med, Dept Pharmacol, Houston, TX 77030 USA
关键词
D O I
10.1093/nar/26.1.160
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The small RNA database is a compilation of all the small size RNA sequences available to date, including nuclear, nucleolar, cytoplasmic and mitochondria small RNAs from eukaryotic organisms and small RNAs from prakaryotic cells as well as viruses. Currently, similar to 600 small RNA sequences are in our database. It also gives the sources of individual RNAs and their GenBank accession numbers. The small RNA database can be accessed through the WWW (World Wide Web), Our WWW URL address is: http://mbcr.bcm.tmc.edu/smallRNA/smallma.html. The new small RNA sequences published since our last compilation are listed in this paper (Table 1).
引用
收藏
页码:160 / 162
页数:3
相关论文
共 31 条
[1]   The RNA world of the nucleolus: Two major families of small RNAs defined by different box elements with related functions [J].
Balakin, AG ;
Smith, L ;
Fournier, MJ .
CELL, 1996, 86 (05) :823-834
[2]   A functional role for some Fugu introns larger than the typical short ones: The example of the gene coding for ribosomal protein S7 and snoRNA U17 [J].
Cecconi, F ;
Crosio, C ;
Mariottini, P ;
Cesareni, G ;
Giorgi, M ;
Brenner, S ;
Amaldi, F .
NUCLEIC ACIDS RESEARCH, 1996, 24 (16) :3167-3172
[3]  
CHANG L, 1996, BIOCHEM BIOPH RES CO, V236, P782
[4]   Fugu intron oversize reveals the presence of U15 snoRNA coding sequences in some introns of the ribosomal protein S3 gene [J].
Crosio, C ;
Cecconi, F ;
Mariottini, P ;
Cesareni, G ;
Brenner, S ;
Amaldi, F .
GENOME RESEARCH, 1996, 6 (12) :1227-1231
[5]   Genes for murine Y1 and Y3 Ro RNAs have class 3 RNA polymerase III promoter structures and are unlinked on mouse chromosome 6 [J].
Farris, AD ;
Gross, JK ;
Hanas, JS ;
Harley, JB .
GENE, 1996, 174 (01) :35-42
[6]   The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation [J].
Ganot, P ;
CaizerguesFerrer, M ;
Kiss, T .
GENES & DEVELOPMENT, 1997, 11 (07) :941-956
[7]   Molecular characterization of U3 small nucleolar RNA from the early diverging protist, Euglena gracilis [J].
Greenwood, SJ ;
Schnare, MN ;
Gray, MW .
CURRENT GENETICS, 1996, 30 (04) :338-346
[8]   Small RNA database [J].
Gu, J ;
Reddy, R .
NUCLEIC ACIDS RESEARCH, 1997, 25 (01) :98-101
[9]   Small RNA database [J].
Gu, J ;
Reddy, R .
NUCLEIC ACIDS RESEARCH, 1996, 24 (01) :73-75
[10]   COMPILATION OF SMALL RNA SEQUENCES [J].
GU, JA ;
REDDY, R .
NUCLEIC ACIDS RESEARCH, 1994, 22 (17) :3481-3482