Cryptotomography: Reconstructing 3D Fourier Intensities from Randomly Oriented Single-Shot Diffraction Patterns

被引:83
作者
Loh, N. D. [1 ]
Bogan, M. J. [2 ]
Elser, V. [1 ]
Barty, A.
Boutet, S. [2 ]
Bajt, S.
Hajdu, J. [4 ]
Ekeberg, T. [4 ]
Maia, F. R. N. C. [4 ]
Schulz, J.
Seibert, M. M. [4 ]
Iwan, B. [4 ]
Timneanu, N. [4 ]
Marchesini, S. [5 ]
Schlichting, I. [3 ,6 ]
Shoeman, R. L. [3 ,6 ]
Lomb, L. [3 ,6 ]
Frank, M. [7 ]
Liang, M.
Chapman, H. N. [8 ]
机构
[1] Cornell Univ, Atom & Solid State Phys Lab, Ithaca, NY 14853 USA
[2] SLAC Natl Accelerator Lab, Menlo Pk, CA 94025 USA
[3] DESY, Ctr Free Electron Laser Sci, Max Planck Adv Study Grp, D-22607 Hamburg, Germany
[4] Uppsala Univ, Dept Cell & Mol Biol, Lab Mol Biophys, SE-75124 Uppsala, Sweden
[5] Univ Calif Berkeley, Lawrence Berkeley Lab, Berkeley, CA 94720 USA
[6] Max Planck Inst Med Res, D-69120 Heidelberg, Germany
[7] Lawrence Livermore Natl Lab, Livermore, CA 94550 USA
[8] Univ Hamburg, D-22761 Hamburg, Germany
基金
瑞典研究理事会;
关键词
FREE-ELECTRON LASER;
D O I
10.1103/PhysRevLett.104.225501
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
We reconstructed the 3D Fourier intensity distribution of monodisperse prolate nanoparticles using single-shot 2D coherent diffraction patterns collected at DESY's FLASH facility when a bright, coherent, ultrafast x-ray pulse intercepted individual particles of random, unmeasured orientations. This first experimental demonstration of cryptotomography extended the expansion-maximization-compression framework to accommodate unmeasured fluctuations in photon fluence and loss of data due to saturation or background scatter. This work is an important step towards realizing single-shot diffraction imaging of single biomolecules.
引用
收藏
页数:5
相关论文
共 13 条
[1]   Camera for coherent diffractive imaging and holography with a soft-x-ray free-electron laser [J].
Bajt, Sasa ;
Chapman, Henry N. ;
Spiller, Eberhard A. ;
Alameda, Jennifer B. ;
Woods, Bruce W. ;
Frank, Matthias ;
Bogan, Michael J. ;
Barty, Anton ;
Boutet, Sebastien ;
Marchesini, Stefano ;
Hau-Riege, Stefan P. ;
Hajdu, Janos ;
Shapiro, David .
APPLIED OPTICS, 2008, 47 (10) :1673-1683
[2]   Non-destructive characterization and alignment of aerodynamically focused particle beams using single particle charge detection [J].
Benner, W. Henry ;
Bogan, Michael J. ;
Rohner, Urs ;
Boutet, Sebastien ;
Woods, Bruce ;
Frank, Matthias .
JOURNAL OF AEROSOL SCIENCE, 2008, 39 (11) :917-928
[3]   Aerosol Imaging with a Soft X-Ray Free Electron Laser [J].
Bogan, Michael J. ;
Boutet, Sebastien ;
Chapman, Henry N. ;
Marchesini, Stefano ;
Barty, Anton ;
Benner, W. Henry ;
Rohner, Urs ;
Frank, Matthias ;
Hau-Riege, Stefan P. ;
Bajt, Sasa ;
Woods, Bruce ;
Seibert, M. Marvin ;
Iwan, Bianca ;
Timneanu, Nicusor ;
Hajdu, Janos ;
Schulz, Joachim .
AEROSOL SCIENCE AND TECHNOLOGY, 2010, 44 (03) :I-VI
[4]  
BOGAN MJ, UNPUB
[5]   Characteristics of focused soft X-ray free-electron laser beam determined by ablation of organic molecular solids [J].
Chalupsky, J. ;
Juha, L. ;
Kuba, J. ;
Cihelka, J. ;
Hajkova, V. ;
Koptyaev, S. ;
Krasa, J. ;
Velyhan, A. ;
Bergh, M. ;
Caleman, C. ;
Hajdu, J. ;
Bionta, R. M. ;
Chapman, H. ;
Hau-Riege, S. P. ;
London, R. A. ;
Jurek, M. ;
Krzywinski, J. ;
Nietubyc, R. ;
Pelka, J. B. ;
Sobierajski, R. ;
Meyer-ter-Vehn, J. ;
Tronnier, A. ;
Sokolowski-Tinten, K. ;
Stojanovic, N. ;
Tiedtke, K. ;
Toleikis, S. ;
Tschentscher, T. ;
Wabnitz, H. ;
Zastrau, U. .
OPTICS EXPRESS, 2007, 15 (10) :6036-6043
[6]   Femtosecond diffractive imaging with a soft-X-ray free-electron laser [J].
Chapman, Henry N. ;
Barty, Anton ;
Bogan, Michael J. ;
Boutet, Sebastien ;
Frank, Matthias ;
Hau-Riege, Stefan P. ;
Marchesini, Stefano ;
Woods, Bruce W. ;
Bajt, Sasa ;
Benner, Henry ;
London, Richard A. ;
Ploenjes, Elke ;
Kuhlmann, Marion ;
Treusch, Rolf ;
Duesterer, Stefan ;
Tschentscher, Thomas ;
Schneider, Jochen R. ;
Spiller, Eberhard ;
Moeller, Thomas ;
Bostedt, Christoph ;
Hoener, Matthias ;
Shapiro, David A. ;
Hodgson, Keith O. ;
Van der Spoel, David ;
Burmeister, Florian ;
Bergh, Magnus ;
Caleman, Carl ;
Huldt, Goesta ;
Seibert, M. Marvin ;
Maia, Filipe R. N. C. ;
Lee, Richard W. ;
Szoeke, Abraham ;
Timneanu, Nicusor ;
Hajdu, Janos .
NATURE PHYSICS, 2006, 2 (12) :839-843
[7]   High-resolution ab initio three-dimensional x-ray diffraction microscopy [J].
Chapman, HN ;
Barty, A ;
Marchesini, S ;
Noy, A ;
Hau-Riege, SR ;
Cui, C ;
Howells, MR ;
Rosen, R ;
He, H ;
Spence, JCH ;
Weierstall, U ;
Beetz, T ;
Jacobsen, C ;
Shapiro, D .
JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION, 2006, 23 (05) :1179-1200
[8]   MAXIMUM LIKELIHOOD FROM INCOMPLETE DATA VIA EM ALGORITHM [J].
DEMPSTER, AP ;
LAIRD, NM ;
RUBIN, DB .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-METHODOLOGICAL, 1977, 39 (01) :1-38
[9]   Noise Limits on Reconstructing Diffraction Signals From Random Tomographs [J].
Elser, Veit .
IEEE TRANSACTIONS ON INFORMATION THEORY, 2009, 55 (10) :4715-4722
[10]   Structure from fleeting illumination of faint spinning objects in flight [J].
Fung, Russell ;
Shneerson, Valentin ;
Saldin, Dilano K. ;
Ourmazd, Abbas .
NATURE PHYSICS, 2009, 5 (01) :64-67