Tracking the excited-state time evolution of the visual pigment with multiconfigurational quantum chemistry

被引:235
作者
Frutos, Luis Manuel
Andruniow, Tadeusz
Santoro, Fabrizio
Ferre, Nicolas
Olivucci, Massimo
机构
[1] Univ Siena, Dipartimento Chim, I-53100 Siena, Italy
[2] Bowling Green State Univ, Dept Chem, Bowling Green, OH 43403 USA
[3] Wroclaw Univ Technol, Dept Chem, Inst Phys & Theoret Chem, PL-50370 Wroclaw, Poland
[4] CNR, Ist Proc Chim Fis, I-56124 Pisa, Italy
[5] Univ Aix Marseille 1, CNRS, UMR 6517, Lab Chim Theor & Modelisat Mol, F-13397 Marseille 20, France
关键词
photoisomerization; rhodopsin; vision;
D O I
10.1073/pnas.0701732104
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The primary event that initiates vision is the photoinduced isomerization of retinal in the visual pigment rhodopsin (Rh). Here, we use a scaled quantum mechanics/molecular mechanics potential that reproduces the isomerization path determined with multiconfigurational perturbation theory to follow the excited-state evolution of bovine Rh. The analysis of a 140-fs trajectory provides a description of the electronic and geometrical changes that prepare the system for decay to the ground state. The data uncover a complex change of the retinal backbone that, at approximate to 60-fs delay, initiates a space saving "asynchronous bicycle-pedal or crankshaft" motion, leading to a conical intersection on a 110-fs time scale. It is shown that the twisted structure achieved at decay features a momentum that provides a natural route toward the photoRh structure recently resolved by using femtosecond-stimulated Raman spectroscopy.
引用
收藏
页码:7764 / 7769
页数:6
相关论文
共 39 条
[11]   NON-ADIABATIC INTERACTIONS IN UNIMOLECULAR DECAY .4. TRANSITION-PROBABILITY AS A FUNCTION OF THE MASSEY PARAMETER [J].
DESOUTERLECOMTE, M ;
LORQUET, JC .
JOURNAL OF CHEMICAL PHYSICS, 1979, 71 (11) :4391-4403
[12]   Probing the rhodopsin cavity with reduced retinal models at the CASPT2//CASSCF/AMBER level of theory [J].
Ferré, N ;
Olivucci, M .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (23) :6868-6869
[13]   Structure at 0.85 Å resolution of an early protein photocycle intermediate [J].
Genick, UK ;
Soltis, SM ;
Kuhn, P ;
Canestrelli, IL ;
Getzoff, ED .
NATURE, 1998, 392 (6672) :206-209
[14]   Computational evidence in favor of a two-state, two-mode model of the retinal chromophore photoisomerization [J].
González-Luque, R ;
Garavelli, M ;
Bernardi, F ;
Merchán, M ;
Robb, MA ;
Olivucci, M .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (17) :9379-9384
[15]   TEMPERATURE AND WAVELENGTH EFFECTS ON PHOTOCHEMISTRY OF RHODOPSIN, ISORHODOPSIN, BACTERIORHODOPSIN AND THEIR PHOTOPRODUCTS [J].
HURLEY, JB ;
EBREY, TG ;
HONIG, B ;
OTTOLENGHI, M .
NATURE, 1977, 270 (5637) :540-542
[16]   Deuterium substitution effect on the excited-state dynamics of rhodopsin [J].
Kakitani, T ;
Akiyama, R ;
Hatano, Y ;
Imamoto, Y ;
Shichida, Y ;
Verdegem, P ;
Lugtenburg, J .
JOURNAL OF PHYSICAL CHEMISTRY B, 1998, 102 (07) :1334-1339
[17]   Photoisomerization in rhodopsin [J].
Kandori, H ;
Shichida, Y ;
Yoshizawa, T .
BIOCHEMISTRY-MOSCOW, 2001, 66 (11) :1197-1209
[18]   Excited-state dynamics of rhodopsin probed by femtosecond fluorescence spectroscopy [J].
Kandori, H ;
Furutani, Y ;
Nishimura, S ;
Shichida, Y ;
Chosrowjan, H ;
Shibata, Y ;
Mataga, N .
CHEMICAL PHYSICS LETTERS, 2001, 334 (4-6) :271-276
[19]   Spontaneous emission study of the femtosecond isomerization dynamics of rhodopsin [J].
Kochendoerfer, GG ;
Mathies, RA .
JOURNAL OF PHYSICAL CHEMISTRY, 1996, 100 (34) :14526-14532
[20]   Structural observation of the primary isomerization in vision with femtosecond-stimulated Raman [J].
Kukura, P ;
McCamant, DW ;
Yoon, S ;
Wandschneider, DB ;
Mathies, RA .
SCIENCE, 2005, 310 (5750) :1006-1009