WormBase: a cross-species database for comparative genomics

被引:94
作者
Harris, TW
Lee, R
Schwarz, E
Bradnam, K
Lawson, D
Chen, W
Blasier, D
Kenny, E
Cunningham, F
Kishore, R
Chan, J
Muller, HM
Petcherski, A
Thorisson, G
Day, A
Bieri, T
Rogers, A
Chen, CK
Spieth, J
Sternberg, P
Durbin, R
Stein, LD
机构
[1] Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
[2] CALTECH, Howard Hughes Med Inst, Pasadena, CA 91125 USA
[3] Sanger Ctr, Hinxton, England
[4] Washington Univ, Genome Sequencing Ctr, St Louis, MO USA
关键词
D O I
10.1093/nar/gkg053
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
WormBase (http://www.wormbase.org/) is a web-accessible central data repository for information about Caenorhabditis elegans and related nematodes. The past two years have seen a significant expansion in the biological scope of WormBase, including the integration of large-scale, genome-wide data sets, the inclusion of genome sequence and gene predictions from related species and active literature curation. This expansion of data has also driven the development and refinement of user interfaces and operability, including a new Genome Browser, new searches and facilities for data access and the inclusion of extensive documentation. These advances have expanded WormBase beyond the obvious target audience of C. elegans researchers, to include researchers wishing to explore problems in functional and comparative genomics within the context of a powerful genetic system.
引用
收藏
页码:133 / 137
页数:5
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