Microsolvation of glycine by silanol ligands: A DFT study

被引:35
作者
Costa, Dominique [1 ]
Lomenech, Claire [1 ]
Meng, Ming [1 ]
Stievano, Lorenzo [1 ]
Lambert, Jean-Francois [1 ]
机构
[1] Univ Paris 06, Lab React Surface, UMR7609, F-75252 Paris 05, France
来源
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM | 2007年 / 806卷 / 1-3期
关键词
glycine; silica; adsorption; frequencies; DFT;
D O I
10.1016/j.theochem.2006.12.006
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The interaction of glycine with SiOH silanols, which cover the surface of amorphous silica are modeled and investigated by means of the DFT B3LYP/6-31++G** method. The neutral and zwitterion form of glycine are considered. Cooperative hydrogen bonding, with one or several silanol groups, are studied. Different scenarii are modeled: adsorption from the gas phase at 0 and 430 K and adsorption of the microsolvated glycine. It is shown that hydroxylated silica does not act to stabilize the zwitterion form of glycine and thus cannot be considered as a "solid solvent": glycine remains more stable in the neutral state when bonded up to 3 silanols. In contrast, if water molecules are adsorbed on the silanols, they act as co-stabilizors of the zwitterionic state. Two distinct domains exist in the (TP) phase diagram: in the first one, glycine is stabilized on silanols and in the second, glycine is more stable in the gas phase. Vibration frequencies are calculated and compared with experimental ones. (c) 2006 Elsevier B.V. All rights reserved.
引用
收藏
页码:253 / 259
页数:7
相关论文
共 25 条
[1]   Dust particles in the atmospheres of terrestrial planets and their roles for prebiotic chemistry: An overview [J].
Basiuk, VA ;
NavarroGonzalez, R .
ASTROPHYSICS AND SPACE SCIENCE, 1996, 236 (01) :61-75
[2]  
BASIUK VA, 1997, J MOL EVOL, V45, P457
[3]  
BASIUK VA, 2003, SURFACTANT SCI SER, V110, P45
[4]  
BASIUK VA, 1991, ORIGINS LIFE EVOL B, V21, P119
[5]   The effect of clay structure on peptide bond formation catalysis [J].
Bujdák, J ;
Rode, BM .
JOURNAL OF MOLECULAR CATALYSIS A-CHEMICAL, 1999, 144 (01) :129-136
[6]  
Burneau A, 1998, SURFACE PROPERTIES OF SILICAS, P147
[7]   Kinetics of conditioning layer formation on stainless steel immersed in seawater [J].
Compère, C ;
Bellon-Fontaine, MN ;
Bertrand, P ;
Costa, D ;
Marcus, P ;
Poleunis, C ;
Pradier, CM ;
Rondot, B ;
Walls, MG .
BIOFOULING, 2001, 17 (02) :129-145
[8]   IR and theoretical studies of monocarbonyl Ni complexes formed by adsorption of CO at low pressure on silica-supported NiII ions [J].
Costa, D ;
Martra, G ;
Che, M ;
Manceron, L ;
Kermarec, M .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (24) :7210-7217
[9]   Hydroxyl groups on γ-alumina surfaces:: A DFT study [J].
Digne, M ;
Sautet, P ;
Raybaud, P ;
Euzen, P ;
Toulhoat, H .
JOURNAL OF CATALYSIS, 2002, 211 (01) :1-5
[10]   ABINITIO THEORY OF POLAR SEMICONDUCTOR SURFACES .1. METHODOLOGY AND THE (2X2) RECONSTRUCTIONS OF GAAS(111) [J].
KAXIRAS, E ;
BARYAM, Y ;
JOANNOPOULOS, JD ;
PANDEY, KC .
PHYSICAL REVIEW B, 1987, 35 (18) :9625-9635