Identification of the coumermycin A1 biosynthetic gene cluster of Streptomyces rishiriensis DSM 40489

被引:123
作者
Wang, ZX [1 ]
Li, SM [1 ]
Heide, L [1 ]
机构
[1] Univ Tubingen, Inst Pharmazeut, D-72076 Tubingen, Germany
关键词
D O I
10.1128/AAC.44.11.3040-3048.2000
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The biosynthetic gene cluster of the aminocoumarin antibiotic coumermycin A(1) was cloned by screening of a cosmid library of Streptomyces rishiriensis DSM 40489 with heterologous probes from a dTDP-glucose 4,6-dehydratase gene, involved in deoxysugar biosynthesis, and from the aminocoumarin resistance gyrase gene gyrB(r), Sequence analysis of a 30.8-kb region upstream of gyrB(r) revealed the presence of 28 complete open reading frames (ORFs), Fifteen of the identified ORFs showed, on average, 84% identity to corresponding ORFs in the biosynthetic gene cluster of novobiocin, another aminocoumarin antibiotic. Possible functions of 17 ORFs in the biosynthesis of coumermycin A(1) could be assigned by comparison with sequences in GenBank Experimental proof for the function of the identified gene cluster was provided by an insertional gene inactivation experiment, which resulted in an abolishment of coumermycin A(1) production.
引用
收藏
页码:3040 / 3048
页数:9
相关论文
共 49 条
[1]   THE 43-KILODALTON N-TERMINAL FRAGMENT OF THE DNA GYRASE-B PROTEIN HYDROLYZES ATP AND BINDS COUMARIN DRUGS [J].
ALI, JA ;
JACKSON, AP ;
HOWELLS, AJ ;
MAXWELL, A .
BIOCHEMISTRY, 1993, 32 (10) :2717-2724
[2]   COUMARINS AS INHIBITORS OF BACTERIAL-DNA GYRASE [J].
ALTHAUS, IW ;
DOLAK, L ;
REUSSER, F .
JOURNAL OF ANTIBIOTICS, 1988, 41 (03) :373-376
[3]   Purification and properties of the Streptomyces peucetius DpsC β-ketoacyl:acyl carrier protein synthase III that specifies the propionate-starter unit for type II polyketide biosynthesis [J].
Bao, WL ;
Sheldon, PJ ;
Hutchinson, CR .
BIOCHEMISTRY, 1999, 38 (30) :9752-9757
[4]   Constructing polyketides: From collie to combinatorial biosynthesis [J].
Bentley, R ;
Bennett, JW .
ANNUAL REVIEW OF MICROBIOLOGY, 1999, 53 :411-446
[5]  
BERGER J, 1979, J CHROMATOGRAPHY LIB, V15, P101
[6]   PLASMID CLONING VECTORS FOR THE CONJUGAL TRANSFER OF DNA FROM ESCHERICHIA-COLI TO STREPTOMYCES SPP [J].
BIERMAN, M ;
LOGAN, R ;
OBRIEN, K ;
SENO, ET ;
RAO, RN ;
SCHONER, BE .
GENE, 1992, 116 (01) :43-49
[7]   EXPERIMENTS RELATED TO BIOSYNTHESIS OF NOVOBIOCIN AND OTHER COUMARINS [J].
BUNTON, CA ;
KENNER, GW ;
ROBINSON, MJ ;
WEBSTER, BR .
TETRAHEDRON, 1963, 19 (06) :1001-&
[8]   3-DIMENSIONAL MODEL OF ESCHERICHIA-COLI GYRASE-B SUBUNIT CRYSTALLIZED IN 2-DIMENSIONS ON NOVOBIOCIN-LINKED PHOSPHOLIPID FILMS [J].
CELIA, H ;
HOERMANN, L ;
SCHULTZ, P ;
LEBEAU, L ;
MALLOUH, V ;
WIGLEY, DB ;
WANG, JC ;
MIOSKOWSKI, C ;
OUDET, P .
JOURNAL OF MOLECULAR BIOLOGY, 1994, 236 (02) :618-628
[9]   Synthesis and biological evaluation of coumarincarboxylic acids as inhibitors of gyrase B. L-rhamnose as an effective substitute for L-noviose [J].
Ferroud, D ;
Collard, J ;
Klich, M ;
Dupuis-Hamelin, C ;
Mauvais, P ;
Lassaigne, P ;
Bonnefoy, A ;
Musicki, B .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 1999, 9 (19) :2881-2886
[10]   The interaction of coumarin antibiotics with fragments of the DNA gyrase B protein [J].
Gormley, NA ;
Orphanides, G ;
Meyer, A ;
Cullis, PM ;
Maxwell, A .
BIOCHEMISTRY, 1996, 35 (15) :5083-5092