共 185 条
Establishing, maintaining and modifying DNA methylation patterns in plants and animals
被引:2702
作者:

Law, Julie A.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA Univ Calif Los Angeles, Howard Hughes Med Inst, Los Angeles, CA 90095 USA

Jacobsen, Steven E.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif Los Angeles, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA Univ Calif Los Angeles, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
机构:
[1] Univ Calif Los Angeles, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
[2] Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
基金:
美国国家卫生研究院;
关键词:
RNA-POLYMERASE-IV;
DE-NOVO METHYLATION;
HISTONE LYSINE METHYLATION;
MAMMALIAN GERM-CELLS;
EMBRYONIC STEM-CELLS;
ARABIDOPSIS-THALIANA;
PIWI PROTEINS;
BINDING PROTEIN;
MOUSE EMBRYO;
SRA DOMAIN;
D O I:
10.1038/nrg2719
中图分类号:
Q3 [遗传学];
学科分类号:
071007 ;
090102 ;
摘要:
Cytosine DNA methylation is a stable epigenetic mark that is crucial for diverse biological processes, including gene and transposon silencing, imprinting and X chromosome inactivation. Recent findings in plants and animals have greatly increased our understanding of the pathways used to accurately target, maintain and modify patterns of DNA methylation and have revealed unanticipated mechanistic similarities between these organisms. Key roles have emerged for small RNAs, proteins with domains that bind methylated DNA and DNA glycosylases in these processes. Drawing on insights from both plants and animals should deepen our understanding of the regulation and biological significance of DNA methylation.
引用
收藏
页码:204 / 220
页数:17
相关论文
共 185 条
[1]
Role of the Arabidopsis DNA glycosylase/lyase ROS1 in active DNA demethylation
[J].
Agius, Fernanda
;
Kapoor, Avnish
;
Zhu, Jian-Kang
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
2006, 103 (31)
:11796-11801

Agius, Fernanda
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Riverside, Ctr Plant Cell Biol, Inst Integrat Gen Biol, Riverside, CA 92521 USA

Kapoor, Avnish
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif Riverside, Ctr Plant Cell Biol, Inst Integrat Gen Biol, Riverside, CA 92521 USA

Zhu, Jian-Kang
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif Riverside, Ctr Plant Cell Biol, Inst Integrat Gen Biol, Riverside, CA 92521 USA Univ Calif Riverside, Ctr Plant Cell Biol, Inst Integrat Gen Biol, Riverside, CA 92521 USA
[2]
Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D-melanogaster germline
[J].
Aravin, AA
;
Naumova, NM
;
Tulin, AV
;
Vagin, VV
;
Rozovsky, YM
;
Gvozdev, VA
.
CURRENT BIOLOGY,
2001, 11 (13)
:1017-1027

Aravin, AA
论文数: 0 引用数: 0
h-index: 0
机构: Inst Mol Genet, Dept Anim Mol Genet, Moscow 123182, Russia

Naumova, NM
论文数: 0 引用数: 0
h-index: 0
机构: Inst Mol Genet, Dept Anim Mol Genet, Moscow 123182, Russia

Tulin, AV
论文数: 0 引用数: 0
h-index: 0
机构: Inst Mol Genet, Dept Anim Mol Genet, Moscow 123182, Russia

Vagin, VV
论文数: 0 引用数: 0
h-index: 0
机构: Inst Mol Genet, Dept Anim Mol Genet, Moscow 123182, Russia

Rozovsky, YM
论文数: 0 引用数: 0
h-index: 0
机构: Inst Mol Genet, Dept Anim Mol Genet, Moscow 123182, Russia

Gvozdev, VA
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Mol Genet, Dept Anim Mol Genet, Moscow 123182, Russia Inst Mol Genet, Dept Anim Mol Genet, Moscow 123182, Russia
[3]
A novel class of small RNAs bind to MILI protein in mouse testes
[J].
Aravin, Alexei
;
Gaidatzis, Dimos
;
Pfeffer, Sebastien
;
Lagos-Quintana, Mariana
;
Landgraf, Pablo
;
Iovino, Nicola
;
Morris, Patricia
;
Brownstein, Michael J.
;
Kuramochi-Miyagawa, Satomi
;
Nakano, Toru
;
Chien, Minchen
;
Russo, James J.
;
Ju, Jingyue
;
Sheridan, Robert
;
Sander, Chris
;
Zavolan, Mihaela
;
Tuschl, Thomas
.
NATURE,
2006, 442 (7099)
:203-207

Aravin, Alexei
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Gaidatzis, Dimos
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Pfeffer, Sebastien
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Lagos-Quintana, Mariana
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Landgraf, Pablo
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Iovino, Nicola
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Morris, Patricia
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Brownstein, Michael J.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Kuramochi-Miyagawa, Satomi
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Nakano, Toru
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Chien, Minchen
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Russo, James J.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Ju, Jingyue
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Sheridan, Robert
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

Sander, Chris
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland

论文数: 引用数:
h-index:
机构:

Tuschl, Thomas
论文数: 0 引用数: 0
h-index: 0
机构: Univ Basel, Bioctr, CH-4056 Basel, Switzerland
[4]
A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice
[J].
Aravin, Alexei A.
;
Sachidanandam, Ravi
;
Bourc'his, Deborah
;
Schaefer, Christopher
;
Pezic, Dubravka
;
Toth, Katalin Fejes
;
Bestor, Timothy
;
Hannon, Gregory J.
.
MOLECULAR CELL,
2008, 31 (06)
:785-799

Aravin, Alexei A.
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA
Cold Spring Harbor Lab, Howard Hughes Med Inst, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

Sachidanandam, Ravi
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA
Cold Spring Harbor Lab, Howard Hughes Med Inst, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

Bourc'his, Deborah
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Paris 07, INSERM, U741, Inst Jacques Monod, F-75251 Paris 05, France Cold Spring Harbor Lab, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

Schaefer, Christopher
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Paris 07, INSERM, U741, Inst Jacques Monod, F-75251 Paris 05, France
Columbia Univ, Coll Phys & Surg, Dept Genet & Dev, New York, NY 10032 USA Cold Spring Harbor Lab, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

Pezic, Dubravka
论文数: 0 引用数: 0
h-index: 0
机构:
Austrian Acad Sci, Inst Mol Biotechnol, A-1030 Vienna, Austria Cold Spring Harbor Lab, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

Toth, Katalin Fejes
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA
Cold Spring Harbor Lab, Howard Hughes Med Inst, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

论文数: 引用数:
h-index:
机构:

Hannon, Gregory J.
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA
Cold Spring Harbor Lab, Howard Hughes Med Inst, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA
[5]
Small RNA guides for de novo DNA methylation in mammalian germ cells
[J].
Aravin, Alexei A.
;
Bourc'his, Deborah
.
GENES & DEVELOPMENT,
2008, 22 (08)
:970-975

Aravin, Alexei A.
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA Univ Paris 07, INSERM, U741, F-75251 Paris 05, France

Bourc'his, Deborah
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Paris 07, INSERM, U741, F-75251 Paris 05, France Univ Paris 07, INSERM, U741, F-75251 Paris 05, France
[6]
The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race
[J].
Aravin, Alexei A.
;
Hannon, Gregory J.
;
Brennecke, Julius
.
SCIENCE,
2007, 318 (5851)
:761-764

Aravin, Alexei A.
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

Hannon, Gregory J.
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

Brennecke, Julius
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA
[7]
Developmentally regulated piRNA clusters implicate MILI in transposon control
[J].
Aravin, Alexei A.
;
Sachidanandam, Ravi
;
Girard, Angelique
;
Fejes-Toth, Katalin
;
Hannon, Gregory J.
.
SCIENCE,
2007, 316 (5825)
:744-747

Aravin, Alexei A.
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

Sachidanandam, Ravi
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

Girard, Angelique
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

Fejes-Toth, Katalin
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA

Hannon, Gregory J.
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Howard Hughes Med Inst, Watson Sch Biol Sci, Cold Spring Harbor, NY 11724 USA
[8]
Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism
[J].
Arita, Kyohei
;
Ariyoshi, Mariko
;
Tochio, Hidehito
;
Nakamura, Yusuke
;
Shirakawa, Masahiro
.
NATURE,
2008, 455 (7214)
:818-U12

Arita, Kyohei
论文数: 0 引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Engn, Kyoto 6158510, Japan Kyoto Univ, Grad Sch Engn, Kyoto 6158510, Japan

论文数: 引用数:
h-index:
机构:

Tochio, Hidehito
论文数: 0 引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Engn, Kyoto 6158510, Japan
Japan Sci & Technol Agcy, CREST, Kawaguchi, Saitama 3320012, Japan Kyoto Univ, Grad Sch Engn, Kyoto 6158510, Japan

Nakamura, Yusuke
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Tokyo, Mol Med Lab, Ctr Human Genome, Inst Med Sci,Minato Ku, Tokyo 1088639, Japan Kyoto Univ, Grad Sch Engn, Kyoto 6158510, Japan

Shirakawa, Masahiro
论文数: 0 引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Engn, Kyoto 6158510, Japan
Japan Sci & Technol Agcy, CREST, Kawaguchi, Saitama 3320012, Japan
RIKEN, Yokohama Inst, Yokohama, Kanagawa 2300045, Japan Kyoto Univ, Grad Sch Engn, Kyoto 6158510, Japan
[9]
IDN1 and IDN2 are required for de novo DNA methylation in Arabidopsis thaliana
[J].
Ausin, Israel
;
Mockler, Todd C.
;
Chory, Joanne
;
Jacobsen, Steven E.
.
NATURE STRUCTURAL & MOLECULAR BIOLOGY,
2009, 16 (12)
:1325-1327

Ausin, Israel
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90024 USA Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90024 USA

Mockler, Todd C.
论文数: 0 引用数: 0
h-index: 0
机构:
Oregon State Univ, Dept Bot & Plant Pathol, Corvallis, OR 97331 USA
Oregon State Univ, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90024 USA

论文数: 引用数:
h-index:
机构:

Jacobsen, Steven E.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90024 USA
Univ Calif Los Angeles, Howard Hughes Med Inst, Los Angeles, CA 90024 USA Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90024 USA
[10]
Structural basis for recognition of hemi-methylated DNA by the SRA domain of human UHRF1
[J].
Avvakumov, George V.
;
Walker, John R.
;
Xue, Sheng
;
Li, Yanjun
;
Duan, Shili
;
Bronner, Christian
;
Arrowsmith, Cheryl H.
;
Dhe-Paganon, Sirano
.
NATURE,
2008, 455 (7214)
:822-U13

Avvakumov, George V.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada

Walker, John R.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada

Xue, Sheng
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada

Li, Yanjun
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada

Duan, Shili
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Ontario Canc Inst, Toronto, ON M5G 1L5, Canada
Univ Toronto, Dept Med Biophys, Toronto, ON M5G 1L5, Canada Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada

Bronner, Christian
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Louis Pasteur Strasbourg 1, Dept Pharmacol & Pharmacochim Interact Cellulaire, Fac Pharm, CNRS,IGL,UMR 7175, F-67401 Illkirch Graffenstaden, France Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada

Arrowsmith, Cheryl H.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada
Univ Toronto, Ontario Canc Inst, Toronto, ON M5G 1L5, Canada
Univ Toronto, Dept Med Biophys, Toronto, ON M5G 1L5, Canada Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada

Dhe-Paganon, Sirano
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada
Univ Toronto, Dept Physiol, Toronto, ON M5G 1L5, Canada Univ Toronto, Struct Genom Consortium, Toronto, ON M5G 1L5, Canada