Convenient synthesis of NCS-chromophore metcabolite isosteres: Binding agents for bulged DNA microenvironments

被引:28
作者
Lin, YQ [1 ]
Jones, GB [1 ]
Hwang, GS [1 ]
Kappen, L [1 ]
Goldberg, IH [1 ]
机构
[1] Northeastern Univ, Dept Chem & Biol Chem, Bioorgan & Med Chem Labs, Boston, MA 02115 USA
关键词
D O I
10.1021/ol0400591
中图分类号
O62 [有机化学];
学科分类号
070303 [有机化学]; 081704 [应用化学];
摘要
A designed molecule with capacity to bind DNA bulges (20) has been prepared from readily available starting materials. The spirocyclic template was modeled on a metabolite of neocarzinostatin chromophore (NCSi-gb) and is equipped with functionality to enable convenient bioassay. Preliminary studies confirm binding at specific bulged sequences and induction of polymerase-mediated slippage events. The target compound offers a convenient means to study affinity for unique bulged motifs and for use as a molecular biology reagent.
引用
收藏
页码:71 / 74
页数:4
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